Cycloclasticus pugetii

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus pugetii is a marine bacterium characterized by its single replicon, which is indicated by its genomic structure. The organism is cataloged in the NCBI database with the accession number FQZJ00000000.1, providing a reference point for genetic and genomic studies. This bacterium is notable for its ecological role, particularly in the degradation of polycyclic aromatic hydrocarbons (PAHs), compounds often found in marine environments as pollutants. Cycloclasticus pugetii contributes to the bioremediation processes, breaking down these complex organic molecules and thus playing a significant role in maintaining the health of marine ecosystems affected by hydrocarbon contamination. Understanding the genetic makeup and functional capabilities of Cycloclasticus pugetii can offer insights into its potential applications in environmental biotechnology, especially in efforts to combat pollution in marine habitats. The study of such organisms is crucial for developing strategies aimed at harnessing their natural abilities to degrade harmful substances, ultimately supporting ecosystem recovery and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus pugetii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus pugetii strain DSM 27168 genome assembly, contig:

Gene Summary

Adenine Count

745157 bp

Thymine Count

739133 bp

Guanine Count

509061 bp

Cytosine Count

547097 bp

Genome Length

2540448 bp

Protein-coding Genes

2391 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp cyclohydrolase iSAMN05519226_0230Not AvailablePositive110303 - 11108529411.9
phosphoenolpyruvate carboxykinase (atp)SAMN05519226_0231Not AvailablePositive111105 - 11270959367.6
nad-dependent formate dehydrogenase flavoprotein subunitSAMN05519226_0232Not AvailablePositive112753 - 11450163597.5
nad-dependent formate dehydrogenase catalytic subunit /nad-dependent formate dehydrogenase iron-sulfur proteinSAMN05519226_0233Not AvailablePositive114502 - 11721699204.6
molybdenum cofactor guanylyltransferaseSAMN05519226_0234Not AvailablePositive117216 - 11785423743.5
fdhd proteinSAMN05519226_0235Not AvailableNegative117857 - 11866329598.3
malate dehydrogenaseSAMN05519226_0236Not AvailableNegative118750 - 11972735058.7
protein of unknown functionSAMN05519226_0237Not AvailableNegative119825 - 12014512762.8
Trna-leuNot AvailableNot AvailablePositive120172 - 120257Not Available
protein translocase subunit secgSAMN05519226_0239Not AvailableNegative120270 - 12066813209.9

Displaying genes 111 – 120 of 360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.