Methanosarcina sp. Ant1

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. Ant1 is a cocci-shaped archaeon known for its unique metabolic capabilities. This organism possesses flagella, which suggests potential motility, enabling it to navigate its environment effectively. Methanosarcina species are known for their role in methane production, contributing to biogeochemical cycling in various ecosystems. The genome of Methanosarcina sp. Ant1 contains a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation in specific niches. The accession number for the genomic data is MDTP00000000.2, which provides a reference point for researchers interested in studying its genetic makeup and functional attributes. The presence of flagella in Methanosarcina sp. Ant1 may also facilitate interactions with other microorganisms in its habitat, potentially influencing community dynamics. As a member of the methanogenic Archaea, it plays a crucial role in the anaerobic degradation of organic matter, particularly in environments such as wetlands, sediments, and the digestive systems of ruminants. In summary, Methanosarcina sp. Ant1 exemplifies the diversity and ecological significance of methanogenic archaea. Its cocci shape, flagella presence, and genomic characteristics underscore its potential role in methane production and nutrient cycling within its ecosystem. Understanding such organisms is vital for insights into methane emissions and their impact on global climate change.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. Ant1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. Ant1


Gene Summary

Adenine Count

1278819 bp

Thymine Count

1291570 bp

Guanine Count

860505 bp

Cytosine Count

860458 bp

Genome Length

4291352 bp

Protein-coding Genes

3244 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBGV40_00005Not AvailableNegative272 - 155844990.2
hypothetical proteinBGV40_00010Not AvailablePositive3126 - 477558970.7
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive3375 - 3734Not Available
hypothetical proteinBGV40_00015Not AvailableNegative6782 - 782540100.4
hypothetical proteinBGV40_00020Not AvailableNegative7830 - 861830485.3
gdp-mannose 4,6-dehydrataseBGV40_00025Not AvailableNegative9781 - 1075536186.3
hypothetical proteinBGV40_00035Not AvailableNegative12525 - 1283912103.9
spore coat proteinBGV40_00040Not AvailableNegative12874 - 1360226632.1
dtdp-4-dehydrorhamnose reductaseBGV40_00045Not AvailableNegative13599 - 1440830528.6
dtdp-glucose 4,6-dehydrataseBGV40_00050Not AvailableNegative14381 - 1533736219.0

Displaying genes 1 – 10 of 3303 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

66 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001514Fe(III)-enterobactinC30H21FeN3O15Chemical structure of Fe(III)-enterobactinNot available
Average719.344Da
Monoisotopic719.0322092Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002232(2E,4Z)-5-hydroxypenta-2,4-diene-1,2,5-tricarboxylateC8H5O7Chemical structure of (2E,4Z)-5-hydroxypenta-2,4-diene-1,2,5-tricarboxylateNot available
Average213.123Da
Monoisotopic213.005173241Da

Displaying 1–10 of 66 metabolites

Health Effects

No health effects information available for this bacterium.