Geodermatophilus sp. DSM 45219

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. DSM 45219 is a species characterized by its cocci-shaped morphology. This bacterium possesses flagella, indicating that it is motile and potentially capable of adapting to various environmental conditions. Genetically, it has a single replicon, which is typical for many bacterial species, suggesting a streamlined genetic organization. The accession number for this strain is FNIQ00000000.1, providing a reference point for researchers interested in its genomic data. This information is crucial for understanding the genetic makeup and potential metabolic capabilities of Geodermatophilus sp. DSM 45219. In terms of ecological insight, Geodermatophilus species are often found in soil environments, where they may play a role in nutrient cycling and the degradation of organic materials. Their motility, as indicated by the presence of flagella, may enhance their ability to colonize different niches within the soil ecosystem, contributing to their ecological versatility and importance in maintaining soil health. The characteristics of Geodermatophilus sp. DSM 45219 highlight its potential contributions to microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 45219
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. DSM 45219 genome assembly, contig:

Gene Summary

Adenine Count

628042 bp

Thymine Count

631549 bp

Guanine Count

1851800 bp

Cytosine Count

1857198 bp

Genome Length

4968589 bp

Protein-coding Genes

4661 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseSAMN05428965_0036Not AvailableNegative4892593 - 489464771896.4
transcriptional regulator, tetr familySAMN05428965_0037Not AvailableNegative4894673 - 489528722175.2
phenylacetate-coa ligaseSAMN05428965_0038Not AvailableNegative4895284 - 489662449692.5
ring-1,2-phenylacetyl-coa epoxidase subunit paaaSAMN05428965_0039Not AvailablePositive4896849 - 489781436148.7
ring-1,2-phenylacetyl-coa epoxidase subunit paabSAMN05428965_0040Not AvailablePositive4897811 - 489817913425.7
ring-1,2-phenylacetyl-coa epoxidase subunit paacSAMN05428965_0041Not AvailablePositive4898303 - 489921432477.2
ring-1,2-phenylacetyl-coa epoxidase subunit paadSAMN05428965_0042Not AvailablePositive4899211 - 489973818524.2
ring-1,2-phenylacetyl-coa epoxidase subunit paaeSAMN05428965_0043Not AvailablePositive4899741 - 490081138891.0
thioesterase superfamilySAMN05428965_0044Not AvailablePositive4900817 - 490123014680.7
predicted arabinose efflux permease, mfs familySAMN05428965_0045Not AvailablePositive4901382 - 490277049982.9

Displaying genes 4661 – 4670 of 4739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.