Geodermatophilus sp. DSM 45219

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. DSM 45219 is a species characterized by its cocci-shaped morphology. This bacterium possesses flagella, indicating that it is motile and potentially capable of adapting to various environmental conditions. Genetically, it has a single replicon, which is typical for many bacterial species, suggesting a streamlined genetic organization. The accession number for this strain is FNIQ00000000.1, providing a reference point for researchers interested in its genomic data. This information is crucial for understanding the genetic makeup and potential metabolic capabilities of Geodermatophilus sp. DSM 45219. In terms of ecological insight, Geodermatophilus species are often found in soil environments, where they may play a role in nutrient cycling and the degradation of organic materials. Their motility, as indicated by the presence of flagella, may enhance their ability to colonize different niches within the soil ecosystem, contributing to their ecological versatility and importance in maintaining soil health. The characteristics of Geodermatophilus sp. DSM 45219 highlight its potential contributions to microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 45219
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. DSM 45219 genome assembly, contig:

Gene Summary

Adenine Count

628042 bp

Thymine Count

631549 bp

Guanine Count

1851800 bp

Cytosine Count

1857198 bp

Genome Length

4968589 bp

Protein-coding Genes

4661 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside abc transporter membrane proteinSAMN05428965_3632Not AvailableNegative3618906 - 362018344113.4
nucleoside abc transporter membrane proteinSAMN05428965_3633Not AvailableNegative3620180 - 362138840433.5
nucleoside abc transporter atp-binding proteinSAMN05428965_3634Not AvailableNegative3621462 - 362303656379.7
nucleoside-binding proteinSAMN05428965_3635Not AvailableNegative3623264 - 362432535875.3
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)SAMN05428965_3636Not AvailablePositive3624609 - 362579038689.3
membrane proteinSAMN05428965_3637Not AvailableNegative3625800 - 362682835944.1
2'-5' rna ligaseSAMN05428965_3638Not AvailableNegative3626997 - 362756320510.4
tryptophanyl-trna synthetaseSAMN05428965_3639Not AvailableNegative3627560 - 362858236605.7
histidinol-phosphate aminotransferaseSAMN05428965_3640Not AvailableNegative3628646 - 362975838879.2
udp-glucose 4-epimeraseSAMN05428965_3641Not AvailablePositive3629827 - 363082835419.6

Displaying genes 3441 – 3450 of 4739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.