Geodermatophilus sp. DSM 45219

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. DSM 45219 is a species characterized by its cocci-shaped morphology. This bacterium possesses flagella, indicating that it is motile and potentially capable of adapting to various environmental conditions. Genetically, it has a single replicon, which is typical for many bacterial species, suggesting a streamlined genetic organization. The accession number for this strain is FNIQ00000000.1, providing a reference point for researchers interested in its genomic data. This information is crucial for understanding the genetic makeup and potential metabolic capabilities of Geodermatophilus sp. DSM 45219. In terms of ecological insight, Geodermatophilus species are often found in soil environments, where they may play a role in nutrient cycling and the degradation of organic materials. Their motility, as indicated by the presence of flagella, may enhance their ability to colonize different niches within the soil ecosystem, contributing to their ecological versatility and importance in maintaining soil health. The characteristics of Geodermatophilus sp. DSM 45219 highlight its potential contributions to microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 45219
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. DSM 45219 genome assembly, contig:

Gene Summary

Adenine Count

628042 bp

Thymine Count

631549 bp

Guanine Count

1851800 bp

Cytosine Count

1857198 bp

Genome Length

4968589 bp

Protein-coding Genes

4661 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit secgSAMN05428965_1860Not AvailableNegative1759774 - 17600078073.49
peptide/nickel transport system substrate-binding proteinSAMN05428965_1861Not AvailableNegative1760089 - 176187661603.8
triosephosphate isomeraseSAMN05428965_1862Not AvailableNegative1761910 - 176273728651.3
phosphoglycerate kinaseSAMN05428965_1863Not AvailableNegative1762737 - 176394241631.6
glyceraldehyde-3-phosphate dehydrogenase (nad+)SAMN05428965_1864Not AvailableNegative1763954 - 176495835291.0
hypothetical proteinSAMN05428965_1865Not AvailableNegative1765245 - 176623435364.6
conserved hypothetical protein, cofd-relatedSAMN05428965_1866Not AvailableNegative1766253 - 176733837162.6
upf0042 nucleotide-binding proteinSAMN05428965_1867Not AvailableNegative1767338 - 176831835536.2
excinuclease abc subunit cSAMN05428965_1868Not AvailableNegative1768315 - 177036975322.7
lysophospholipase, alpha-beta hydrolase superfamilySAMN05428965_1869Not AvailableNegative1770476 - 177139631784.6

Displaying genes 1711 – 1720 of 4739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.