Geodermatophilus sp. DSM 45219

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. DSM 45219 is a species characterized by its cocci-shaped morphology. This bacterium possesses flagella, indicating that it is motile and potentially capable of adapting to various environmental conditions. Genetically, it has a single replicon, which is typical for many bacterial species, suggesting a streamlined genetic organization. The accession number for this strain is FNIQ00000000.1, providing a reference point for researchers interested in its genomic data. This information is crucial for understanding the genetic makeup and potential metabolic capabilities of Geodermatophilus sp. DSM 45219. In terms of ecological insight, Geodermatophilus species are often found in soil environments, where they may play a role in nutrient cycling and the degradation of organic materials. Their motility, as indicated by the presence of flagella, may enhance their ability to colonize different niches within the soil ecosystem, contributing to their ecological versatility and importance in maintaining soil health. The characteristics of Geodermatophilus sp. DSM 45219 highlight its potential contributions to microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 45219
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. DSM 45219 genome assembly, contig:

Gene Summary

Adenine Count

628042 bp

Thymine Count

631549 bp

Guanine Count

1851800 bp

Cytosine Count

1857198 bp

Genome Length

4968589 bp

Protein-coding Genes

4661 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyldiaminopimelate aminotransferase apoenzymeSAMN05428965_0237Not AvailableNegative113619 - 11474039101.6
nad-dependent dihydropyrimidine dehydrogenase, prea subunitSAMN05428965_0238Not AvailableNegative114737 - 11506311817.8
acetyltransferase (gnat) family proteinSAMN05428965_0239Not AvailablePositive115222 - 11597426445.4
hypothetical proteinSAMN05428965_0240Not AvailableNegative115931 - 11635013727.4
n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylaseSAMN05428965_0241Not AvailableNegative116347 - 11724031877.6
oligopeptide transport system atp-binding proteinSAMN05428965_0242Not AvailableNegative117455 - 11858840964.7
oligopeptide transport system atp-binding proteinSAMN05428965_0243Not AvailableNegative118581 - 11963037131.7
peptide/nickel transport system permease protein/oligopeptide transport system permease proteinSAMN05428965_0244Not AvailableNegative119627 - 12057734037.9
oligopeptide transport system permease proteinSAMN05428965_0245Not AvailableNegative120570 - 12149333224.3
oligopeptide transport system substrate-binding proteinSAMN05428965_0246Not AvailableNegative121631 - 12328659004.2

Displaying genes 161 – 170 of 4739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.