Sphingomonas sp. OK281

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. OK281 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in various environments. The accession number for this strain is FOVZ00000000.1, which is essential for referencing its genomic data in biological databases. As a member of the Sphingomonas genus, Sphingomonas sp. OK281 is likely involved in biogeochemical cycles, particularly in the degradation of complex organic compounds. Members of this genus are known for their metabolic versatility, enabling them to thrive in diverse ecological niches. Their ability to degrade environmental pollutants suggests a potential role in bioremediation efforts. The presence of flagella is significant as it not only aids in locomotion but may also influence the bacterium's ability to colonize specific habitats. This motility can enhance the organism's interactions with its environment, potentially allowing it to exploit resources more effectively than non-motile counterparts. In summary, Sphingomonas sp. OK281, with its rod shape, flagellar motility, and single replicon, exemplifies the ecological adaptability of the Sphingomonas genus. Its metabolic capabilities underscore the bacterium's potential importance in environmental sustainability, particularly in the context of pollutant degradation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. OK281
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. OK281
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. OK281 genome assembly, contig: Ga0115506_120,

Gene Summary

Adenine Count

883271 bp

Thymine Count

885518 bp

Guanine Count

1638843 bp

Cytosine Count

1643092 bp

Genome Length

5050724 bp

Protein-coding Genes

4468 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb9SAMN05428984_0050Not AvailablePositive47550 - 4850934403.1
type iv secretion system protein virb10SAMN05428984_0051Not AvailablePositive48506 - 4972042509.7
hypothetical proteinSAMN05428984_0052Not AvailablePositive49730 - 499488157.88
transcriptional regulator, alpa familySAMN05428984_0053Not AvailableNegative50359 - 505748050.62
dna-binding transcriptional regulator, xre-family hth domainSAMN05428984_0054Not AvailableNegative50959 - 511898383.87
rna polymerase sigma-70 factor, ecf subfamilySAMN05428984_0055Not AvailablePositive51308 - 5183820200.2
fecr family proteinSAMN05428984_0056Not AvailablePositive51855 - 5282034190.2
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN05428984_0057Not AvailablePositive53821 - 5439020752.5
dtdp-glucose 4,6-dehydrataseSAMN05428984_0058Not AvailablePositive54402 - 5545738894.6
dtdp-4-dehydrorhamnose reductaseSAMN05428984_0059Not AvailablePositive55454 - 5637731968.4

Displaying genes 51 – 60 of 4523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.