Sphingomonas sp. OK281

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. OK281 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in various environments. The accession number for this strain is FOVZ00000000.1, which is essential for referencing its genomic data in biological databases. As a member of the Sphingomonas genus, Sphingomonas sp. OK281 is likely involved in biogeochemical cycles, particularly in the degradation of complex organic compounds. Members of this genus are known for their metabolic versatility, enabling them to thrive in diverse ecological niches. Their ability to degrade environmental pollutants suggests a potential role in bioremediation efforts. The presence of flagella is significant as it not only aids in locomotion but may also influence the bacterium's ability to colonize specific habitats. This motility can enhance the organism's interactions with its environment, potentially allowing it to exploit resources more effectively than non-motile counterparts. In summary, Sphingomonas sp. OK281, with its rod shape, flagellar motility, and single replicon, exemplifies the ecological adaptability of the Sphingomonas genus. Its metabolic capabilities underscore the bacterium's potential importance in environmental sustainability, particularly in the context of pollutant degradation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. OK281
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. OK281
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. OK281 genome assembly, contig: Ga0115506_120,

Gene Summary

Adenine Count

883271 bp

Thymine Count

885518 bp

Guanine Count

1638843 bp

Cytosine Count

1643092 bp

Genome Length

5050724 bp

Protein-coding Genes

4468 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptor plug domainSAMN05428984_4068Not AvailableNegative4464296 - 4467244104528.0
hypothetical proteinSAMN05428984_4070Not AvailablePositive4468126 - 446845512293.8
type iv secretory pathway, vird2 components (relaxase)SAMN05428984_4071Not AvailableNegative4468867 - 447083173463.5
hypothetical proteinSAMN05428984_4072Not AvailableNegative4471099 - 447168021226.5
transglycosylase slt domain-containing proteinSAMN05428984_4073Not AvailableNegative4471717 - 447234922507.2
conjugative transfer signal peptidase trafSAMN05428984_4074Not AvailableNegative4472337 - 447292121582.5
hypothetical proteinSAMN05428984_4075Not AvailableNegative4472914 - 44731478927.55
uncharacterized conserved protein, duf736 familySAMN05428984_4076Not AvailableNegative4473303 - 447360210971.9
hypothetical proteinSAMN05428984_4077Not AvailableNegative4473874 - 447457525849.2
protein of unknown functionSAMN05428984_4078Not AvailableNegative4474572 - 447499115066.9

Displaying genes 4001 – 4010 of 4523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.