Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Loktanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Loktanella |
| Species | Loktanella sp. DSM 29012 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
650852 bp
Thymine Count
655904 bp
Guanine Count
1057300 bp
Cytosine Count
1053423 bp
Genome Length
3417479 bp
Protein-coding Genes
3275 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05428995_10810 | Not Available | Negative | 3069941 - 3071830 | 67802.5 |
| ca2+-binding protein, rtx toxin-related | SAMN05428995_10811 | Not Available | Positive | 3072090 - 3075572 | 117514.0 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05428995_10812 | Not Available | Negative | 3075565 - 3076173 | 22789.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN05428995_10813 | Not Available | Negative | 3076170 - 3076991 | 27756.5 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05428995_10814 | Not Available | Negative | 3077037 - 3078449 | 48921.2 |
| polysaccharide export outer membrane protein | SAMN05428995_10815 | Not Available | Negative | 3078632 - 3079759 | 39423.0 |
| udp-galactopyranose mutase | SAMN05428995_10816 | Not Available | Positive | 3079953 - 3081101 | 42752.3 |
| glycosyltransferase, gt2 family | SAMN05428995_10817 | Not Available | Positive | 3081098 - 3082087 | 36302.4 |
| capsular polysaccharide transport system permease protein | SAMN05428995_10818 | Not Available | Positive | 3082117 - 3083340 | 44981.5 |
| capsular polysaccharide transport system atp-binding protein | SAMN05428995_10819 | Not Available | Positive | 3083337 - 3084005 | 24128.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
