Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Loktanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Loktanella |
| Species | Loktanella sp. DSM 29012 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
650852 bp
Thymine Count
655904 bp
Guanine Count
1057300 bp
Cytosine Count
1053423 bp
Genome Length
3417479 bp
Protein-coding Genes
3275 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructuronate reductase | SAMN05428995_104103 | Not Available | Positive | 2050300 - 2051757 | 52349.4 |
| mannonate dehydratase | SAMN05428995_104104 | Not Available | Positive | 2051757 - 2052929 | 42606.6 |
| altronate hydrolase | SAMN05428995_104105 | Not Available | Positive | 2052922 - 2054445 | 52226.1 |
| alpha-galactosidase | SAMN05428995_104106 | Not Available | Positive | 2054442 - 2055827 | 50642.2 |
| oligogalacturonide transport system permease protein | SAMN05428995_104107 | Not Available | Positive | 2055827 - 2056711 | 33138.8 |
| oligogalacturonide transport system permease protein | SAMN05428995_104108 | Not Available | Positive | 2056716 - 2057627 | 34645.0 |
| oligogalacturonide transport system atp-binding protein | SAMN05428995_104109 | Not Available | Positive | 2057627 - 2058763 | 40908.7 |
| oligogalacturonide transport system substrate-binding protein | SAMN05428995_104110 | Not Available | Positive | 2058774 - 2060036 | 45184.8 |
| polygalacturonase | SAMN05428995_104111 | Not Available | Positive | 2060100 - 2061605 | 53110.8 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN05428995_104112 | Not Available | Positive | 2061595 - 2062650 | 39235.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
