Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Loktanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Loktanella |
| Species | Loktanella sp. DSM 29012 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
650852 bp
Thymine Count
655904 bp
Guanine Count
1057300 bp
Cytosine Count
1053423 bp
Genome Length
3417479 bp
Protein-coding Genes
3275 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease yncb, thermonuclease family | SAMN05428995_102426 | Not Available | Negative | 1363650 - 1364294 | 23120.4 |
| choline dehydrogenase | SAMN05428995_102427 | Not Available | Negative | 1364368 - 1365978 | 58742.8 |
| betaine-aldehyde dehydrogenase | SAMN05428995_102428 | Not Available | Negative | 1366100 - 1367554 | 50985.5 |
| tetr/acrr family transcriptional regulator, transcriptional repressor of bet genes | SAMN05428995_102429 | Not Available | Negative | 1367594 - 1368148 | 19752.0 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05428995_102430 | Not Available | Positive | 1368234 - 1369163 | 32568.9 |
| glycine betaine/proline transport system permease protein | SAMN05428995_102431 | Not Available | Positive | 1369366 - 1370214 | 30412.4 |
| glycine betaine/proline transport system atp-binding protein | SAMN05428995_102432 | Not Available | Positive | 1370211 - 1371224 | 36326.9 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05428995_102433 | Not Available | Positive | 1371242 - 1371682 | 16214.5 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05428995_102434 | Not Available | Negative | 1371814 - 1372563 | 27017.6 |
| di-and tricarboxylate transporter | SAMN05428995_102435 | Not Available | Negative | 1372632 - 1374407 | 63323.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
