Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Loktanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Loktanella |
| Species | Loktanella sp. DSM 29012 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
650852 bp
Thymine Count
655904 bp
Guanine Count
1057300 bp
Cytosine Count
1053423 bp
Genome Length
3417479 bp
Protein-coding Genes
3275 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vasi, evfg, vc_a0118 | SAMN05428995_101940 | Not Available | Negative | 929760 - 930749 | 36054.8 |
| putative transposase | SAMN05428995_101941 | Not Available | Negative | 930803 - 931399 | 23290.4 |
| catechol 2,3-dioxygenase | SAMN05428995_101942 | Not Available | Negative | 932078 - 932497 | 15520.3 |
| cytidine and deoxycytidylate deaminase zinc-binding region | SAMN05428995_101943 | Not Available | Positive | 932564 - 933046 | 17221.6 |
| mechanosensitive ion channel | SAMN05428995_101944 | Not Available | Negative | 933496 - 935142 | 61023.2 |
| protein of unknown function | SAMN05428995_1021 | Not Available | Negative | 935786 - 936232 | 16642.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05428995_1022 | Not Available | Positive | 936407 - 936751 | 12017.3 |
| acyl-coa thioester hydrolase | SAMN05428995_1023 | Not Available | Positive | 936748 - 937218 | 18108.7 |
| glucose-6-phosphate isomerase | SAMN05428995_1024 | Not Available | Negative | 937215 - 938813 | 57123.7 |
| 6-phosphogluconolactonase | SAMN05428995_1025 | Not Available | Negative | 938819 - 939490 | 24142.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
