Rhodanobacter sp. OK091

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. OK091 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is notable for having a single replicon, which indicates a streamlined genomic organization that may contribute to its adaptability in various environments. The complete genome of Rhodanobacter sp. OK091 is available under the accession number FRCH00000000.1, providing a resource for further genetic and functional studies. Rhodanobacter species are generally known for their roles in biogeochemical cycles, particularly in the degradation of sulfur compounds and the cycling of nitrogen. This capability suggests that Rhodanobacter sp. OK091 may play a significant role in soil ecosystems, particularly in areas where sulfur and nitrogen dynamics are critical. Understanding the specific metabolic pathways and ecological interactions of this bacterium can provide insights into its ecological significance and potential applications in bioremediation or soil health management. The traits of Rhodanobacter sp. OK091 highlight its potential importance in environmental microbiology, particularly in nutrient cycling and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. OK091
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter sp. OK091 genome assembly, contig: Ga0115501_111,

Gene Summary

Adenine Count

800439 bp

Thymine Count

797991 bp

Guanine Count

1405295 bp

Cytosine Count

1416161 bp

Genome Length

4419886 bp

Protein-coding Genes

3809 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline 4-hydroxylase (includes rps23 pro-64 3,4-dihydroxylase tpa1), contains sm-20 domainSAMN05428972_2223Not AvailablePositive2490727 - 249165335355.5
hypothetical proteinSAMN05428972_2224Not AvailablePositive2492095 - 24922595900.47
assimilatory nitrate reductase (nadh) beta subunitSAMN05428972_2225Not AvailablePositive2492256 - 249352746096.8
assimilatory nitrate reductase (nadh) alpha subunit apoproteinSAMN05428972_2226Not AvailablePositive2493524 - 249623297575.3
uroporphyrinogen-iii synthaseSAMN05428972_2227Not AvailableNegative2496256 - 249711031306.5
uroporphyrin-iii c-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelataseSAMN05428972_2228Not AvailablePositive2497293 - 249868149560.1
mfs transporter, nnp family, nitrate/nitrite transporterSAMN05428972_2229Not AvailablePositive2498932 - 250029348468.1
assimilatory nitrite reductase (nad(p)h) large subunit precursorSAMN05428972_2230Not AvailablePositive2500319 - 250288393768.0
assimilatory nitrite reductase (nad(p)h) small subunitSAMN05428972_2231Not AvailablePositive2502888 - 250322912424.0
ribbon-helix-helix protein, copg familySAMN05428972_2232Not AvailableNegative2503284 - 25035269386.25

Displaying genes 2221 – 2230 of 3871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.