Rhodanobacter sp. OK091

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. OK091 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is notable for having a single replicon, which indicates a streamlined genomic organization that may contribute to its adaptability in various environments. The complete genome of Rhodanobacter sp. OK091 is available under the accession number FRCH00000000.1, providing a resource for further genetic and functional studies. Rhodanobacter species are generally known for their roles in biogeochemical cycles, particularly in the degradation of sulfur compounds and the cycling of nitrogen. This capability suggests that Rhodanobacter sp. OK091 may play a significant role in soil ecosystems, particularly in areas where sulfur and nitrogen dynamics are critical. Understanding the specific metabolic pathways and ecological interactions of this bacterium can provide insights into its ecological significance and potential applications in bioremediation or soil health management. The traits of Rhodanobacter sp. OK091 highlight its potential importance in environmental microbiology, particularly in nutrient cycling and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. OK091
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter sp. OK091 genome assembly, contig: Ga0115501_111,

Gene Summary

Adenine Count

800439 bp

Thymine Count

797991 bp

Guanine Count

1405295 bp

Cytosine Count

1416161 bp

Genome Length

4419886 bp

Protein-coding Genes

3809 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporter, pat family, beta-lactamase induction signal transducer ampgSAMN05428972_1902Not AvailablePositive2128319 - 212954844237.1
hypothetical proteinSAMN05428972_1903Not AvailablePositive2129650 - 212996111194.4
anhydro-n-acetylmuramic acid kinaseSAMN05428972_1904Not AvailableNegative2129907 - 213106140186.0
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05428972_1905Not AvailableNegative2131075 - 213259856123.0
tyrosyl-trna synthetaseSAMN05428972_1906Not AvailablePositive2132698 - 213390944636.0
udp-2,3-diacylglucosamine hydrolaseSAMN05428972_1908Not AvailableNegative2134515 - 213524326704.8
peptidyl-prolyl cis-trans isomerase a (cyclophilin a)SAMN05428972_1909Not AvailableNegative2135252 - 213597425185.4
exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphataseSAMN05428972_1910Not AvailableNegative2136060 - 213757755267.6
polyphosphate kinaseSAMN05428972_1911Not AvailableNegative2137645 - 213973878440.8
two-component system, ompr family, phosphate regulon sensor histidine kinase phorSAMN05428972_1912Not AvailableNegative2139787 - 214105545838.0

Displaying genes 1901 – 1910 of 3871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.