Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Devosiaceae
Genus
Devosia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Devosiaceae |
| Genus | Devosia |
| Species | Devosia sp. YR412 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Populus root and rhizosphere microbial communities |
| Biotic relationship | Not Available |
| Host(s) | Populus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723195 bp
Thymine Count
712583 bp
Guanine Count
1175938 bp
Cytosine Count
1219499 bp
Genome Length
3831215 bp
Protein-coding Genes
3687 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoin racemase | SAMN05428969_0952 | Not Available | Negative | 980236 - 980970 | 25324.7 |
| putative spermidine/putrescine transport system permease protein | SAMN05428969_0953 | Not Available | Negative | 980967 - 981785 | 29704.6 |
| putative spermidine/putrescine transport system permease protein | SAMN05428969_0954 | Not Available | Negative | 981787 - 982644 | 31713.8 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05428969_0955 | Not Available | Negative | 982711 - 983997 | 46400.2 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05428969_0956 | Not Available | Negative | 984030 - 985118 | 38385.5 |
| transcriptional regulator, gntr family | SAMN05428969_0957 | Not Available | Positive | 985379 - 986098 | 25874.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05428969_0958 | Not Available | Negative | 986150 - 986896 | 25905.3 |
| arac-type dna-binding protein | SAMN05428969_0959 | Not Available | Positive | 986999 - 987934 | 33773.6 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05428969_0960 | Not Available | Negative | 987926 - 988861 | 33428.1 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05428969_0961 | Not Available | Negative | 988858 - 989736 | 31364.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
