Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Devosiaceae
Genus
Devosia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Devosiaceae |
| Genus | Devosia |
| Species | Devosia sp. YR412 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Populus root and rhizosphere microbial communities |
| Biotic relationship | Not Available |
| Host(s) | Populus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723195 bp
Thymine Count
712583 bp
Guanine Count
1175938 bp
Cytosine Count
1219499 bp
Genome Length
3831215 bp
Protein-coding Genes
3687 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleic-acid-binding protein, contains pin domain | SAMN05428969_2103 | Not Available | Negative | 2163880 - 2164278 | 14650.7 |
| looped-hinge helix dna binding domain-containing protein, abrb family | SAMN05428969_2104 | Not Available | Negative | 2164275 - 2164556 | 9907.25 |
| holliday junction dna helicase subunit ruva | SAMN05428969_2105 | Not Available | Negative | 2164618 - 2165235 | 21219.8 |
| holliday junction endonuclease ruvc | SAMN05428969_2106 | Not Available | Negative | 2165232 - 2165738 | 17555.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05428969_2107 | Not Available | Positive | 2165971 - 2166744 | 28000.2 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05428969_2108 | Not Available | Negative | 2166795 - 2167541 | 26821.5 |
| hypothetical protein | SAMN05428969_2109 | Not Available | Positive | 2167670 - 2167978 | 11311.5 |
| hypothetical protein | SAMN05428969_2110 | Not Available | Negative | 2167975 - 2168793 | 29105.8 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05428969_2111 | Not Available | Negative | 2168790 - 2169377 | 21374.8 |
| toxin pare1/3/4 | SAMN05428969_2113 | Not Available | Negative | 2169595 - 2169882 | 10959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
