Limnothrix sp. P13C2

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Pseudanabaenales

Family

Pseudanabaenaceae

Genus

Limnothrix

Description

Limnothrix sp. P13C2 is characterized by having a single replicon, which indicates a streamlined genetic structure. The organism is cataloged under the accession number MBRF00000000.1, allowing for its identification and access to genomic data within biological databases. As a member of the genus Limnothrix, this organism is likely to be found in freshwater environments. Members of this genus are known for their ability to thrive in oligotrophic conditions, where nutrient levels are low. This ecological preference suggests that Limnothrix sp. P13C2 may play a role in nutrient cycling and could contribute to the overall health of aquatic ecosystems by participating in primary production. The presence of a single replicon may also be indicative of a relatively simple regulatory mechanism for gene expression, which can be an advantage in fluctuating environmental conditions. This genetic simplicity could facilitate rapid adaptations to changing ecosystems, making Limnothrix sp. P13C2 an important player in its habitat. In summary, Limnothrix sp. P13C2, with its single replicon and established genomic reference, represents an organism that is well-suited for survival in low-nutrient freshwater environments. Its ecological role could be significant in maintaining the balance of aquatic ecosystems, underscoring the importance of studying such microorganisms in understanding freshwater biodiversity and ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderPseudanabaenales
FamilyPseudanabaenaceae
GenusLimnothrix
SpeciesLimnothrix sp. P13C2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPandan Reservoir
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnothrix sp. P13C2 contig_75, whole genome shotgun sequence.

Gene Summary

Adenine Count

1022162 bp

Thymine Count

1027067 bp

Guanine Count

1266509 bp

Cytosine Count

1267038 bp

Genome Length

4583806 bp

Protein-coding Genes

3663 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBCR12_11715Not AvailableNegative3424490 - 342491216021.3
hypothetical proteinBCR12_11720Not AvailablePositive3425287 - 342612030629.9
serine/threonine protein phosphataseBCR12_11725Not AvailableNegative3426177 - 342693528367.0
hypothetical proteinBCR12_11730Not AvailableNegative3427370 - 342812527400.7
atp-dependent zn proteaseBCR12_11735Not AvailablePositive3428206 - 342892825923.9
abc transporterBCR12_11740Not AvailableNegative3428961 - 343004639827.2
transglutaminaseBCR12_11745Not AvailableNegative3430227 - 343187961871.7
dtdp-4-dehydrorhamnose 3,5-epimeraseBCR12_11750Not AvailablePositive3432486 - 343293216491.2
hypothetical proteinBCR12_11755Not AvailableNegative3433054 - 343354517704.1
trna n6-adenosine(37)-n6-threonylcarbamoyltransferase complex dimerization subunit tsabBCR12_11760Not AvailableNegative3433657 - 343428923002.4

Displaying genes 2831 – 2840 of 3721 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.