Limnothrix sp. P13C2

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Pseudanabaenales

Family

Pseudanabaenaceae

Genus

Limnothrix

Description

Limnothrix sp. P13C2 is characterized by having a single replicon, which indicates a streamlined genetic structure. The organism is cataloged under the accession number MBRF00000000.1, allowing for its identification and access to genomic data within biological databases. As a member of the genus Limnothrix, this organism is likely to be found in freshwater environments. Members of this genus are known for their ability to thrive in oligotrophic conditions, where nutrient levels are low. This ecological preference suggests that Limnothrix sp. P13C2 may play a role in nutrient cycling and could contribute to the overall health of aquatic ecosystems by participating in primary production. The presence of a single replicon may also be indicative of a relatively simple regulatory mechanism for gene expression, which can be an advantage in fluctuating environmental conditions. This genetic simplicity could facilitate rapid adaptations to changing ecosystems, making Limnothrix sp. P13C2 an important player in its habitat. In summary, Limnothrix sp. P13C2, with its single replicon and established genomic reference, represents an organism that is well-suited for survival in low-nutrient freshwater environments. Its ecological role could be significant in maintaining the balance of aquatic ecosystems, underscoring the importance of studying such microorganisms in understanding freshwater biodiversity and ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderPseudanabaenales
FamilyPseudanabaenaceae
GenusLimnothrix
SpeciesLimnothrix sp. P13C2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPandan Reservoir
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnothrix sp. P13C2 contig_75, whole genome shotgun sequence.

Gene Summary

Adenine Count

1022162 bp

Thymine Count

1027067 bp

Guanine Count

1266509 bp

Cytosine Count

1267038 bp

Genome Length

4583806 bp

Protein-coding Genes

3663 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBCR12_09825Not AvailablePositive2245034 - 22452347122.67
apocarotenoid-15,15'-oxygenaseBCR12_09830Not AvailableNegative2245268 - 224680956751.1
hypothetical proteinBCR12_09835Not AvailableNegative2247695 - 224808414651.8
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaBCR12_09840Not AvailablePositive2248196 - 224936542733.1
rod shape-determining proteinBCR12_09845Not AvailablePositive2249887 - 225089135324.1
rod shape-determining protein mrecBCR12_09850Not AvailablePositive2251289 - 225215831213.5
rod shape-determining protein mredBCR12_09855Not AvailablePositive2252267 - 225278518868.4
family 2 glycosyl transferaseBCR12_09860Not AvailablePositive2252880 - 225384236273.9
trna 2-thiouridine(34) synthase mnmaBCR12_09865Not AvailablePositive2254002 - 225510240157.9
molybdopterin synthaseBCR12_09870Not AvailablePositive2255259 - 225575317970.6

Displaying genes 1861 – 1870 of 3721 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.