Crenothrix sp. D3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Crenotrichaceae

Genus

Crenothrix

Description

Crenothrix sp. D3 is characterized by having a single replicon, a trait that may influence its genetic stability and metabolic capabilities. The organism is cataloged under the accession number MBQZ00000000.1, which provides a reference point for its genomic data. Crenothrix species are known to be filamentous bacteria that typically thrive in aquatic environments, particularly in freshwater and organic-rich habitats. These organisms play a significant role in biogeochemical cycles, particularly in the cycling of nutrients such as carbon and nitrogen. Their ability to form biofilms can impact the ecology of their environments, influencing nutrient availability and ecosystem dynamics. The single replicon trait suggests that Crenothrix sp. D3 may exhibit streamlined genetic regulation, which could be advantageous in fluctuating environmental conditions. This genetic configuration might allow for efficient response to changes in nutrient availability or other stressors in its habitat. In summary, Crenothrix sp. D3 represents a unique microbial entity with a single replicon, which may be significant for its ecological role in nutrient cycling and biofilm formation. Understanding these traits further enhances our knowledge of its potential impact on aquatic ecosystems and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyCrenotrichaceae
GenusCrenothrix
SpeciesCrenothrix sp. D3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Crenothrix sp. D3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmethane sinks
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Crenothrix sp. D3 NODE_9_length_91965_cov_11.3953_ID_17, whole

Gene Summary

Adenine Count

1051781 bp

Thymine Count

1049176 bp

Guanine Count

766913 bp

Cytosine Count

765900 bp

Genome Length

3633770 bp

Protein-coding Genes

3245 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogenase iron-molybdenum cofactor biosynthesis protein nifnBCS42_09890Not AvailableNegative231205 - 23259650071.4
acyl-coa thioesteraseBCS42_09895Not AvailableNegative233020 - 23351718717.5
hypothetical proteinBCS42_09900Not AvailablePositive233661 - 23397811814.5
radical sam proteinBCS42_09915Not AvailableNegative236846 - 23782336248.7
hypothetical proteinBCS42_09920Not AvailablePositive237952 - 23933151181.9
hypothetical proteinBCS42_09925Not AvailablePositive239431 - 23996119780.1
pas domain s-box proteinBCS42_09930Not AvailableNegative239967 - 24189273176.7
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolyzing)BCS42_09935Not AvailablePositive241956 - 24323045641.9
4-hydroxythreonine-4-phosphate dehydrogenase pdxaBCS42_09940Not AvailablePositive243262 - 24424834709.3
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseBCS42_09945Not AvailablePositive244255 - 24504029630.0

Displaying genes 221 – 230 of 484 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.