Sphingobacterium alkalisoli str. Y3L14

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium alkalisoli str. Y3L14 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This organism thrives optimally at a temperature of 29°C, positioning it within the mesophilic range, indicating its preference for moderate temperatures. The bacterium possesses a single replicon, which is an important trait for its genomic structure and replication. Notably, Sphingobacterium alkalisoli str. Y3L14 is non-spore-forming, suggesting that its survival strategy does not rely on sporulation, a common trait in many other bacterial species for enduring harsh environmental conditions. The organism's classification and genetic information can be referenced through its accession number, SUKA00000000.1, which provides a basis for further genetic and biochemical studies. From an ecological perspective, Sphingobacterium alkalisoli str. Y3L14 may play a role in the degradation of organic materials in its environment, particularly in alkaline soils, given its association with the genus Sphingobacterium, which is known for its versatility in various ecological niches. Its aerobic nature suggests it contributes to biogeochemical cycles, particularly in environments where oxygen is present. This bacterium exemplifies the diversity of microbial life and its potential applications in environmental biotechnology, especially in soil health and maintenance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium alkalisoli
StrainY3L14

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium alkalisoli str. Y3L14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium alkalisoli strain Y3L14 Scaffold22, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome-c oxidase, cbb3-type subunit iFAZ19_22880Not AvailableNegative5597579 - 559972080901.0
lytic transglycosylase domain-containing proteinFAZ19_22885Not AvailableNegative5599899 - 560067529396.4
rrna pseudouridine synthaseFAZ19_22890Not AvailablePositive5600914 - 560230853667.0
hypothetical proteinFAZ19_22895Not AvailablePositive5602383 - 560285017433.7
tigr01212 family radical sam proteinFAZ19_22900Not AvailableNegative5602976 - 560392336042.2
duf11 domain-containing proteinFAZ19_22910Not AvailableNegative5604218 - 5607524116445.0
tetratricopeptide repeat proteinFAZ19_22915Not AvailablePositive5607849 - 560938758973.8
helix-turn-helix transcriptional regulatorFAZ19_22920Not AvailableNegative5609390 - 561094358891.6
helix-turn-helix domain-containing proteinFAZ19_22925Not AvailableNegative5610936 - 561203042046.8
helix-turn-helix domain-containing proteinFAZ19_22930Not AvailableNegative5612024 - 561298037140.8

Displaying genes 4521 – 4530 of 4685 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.