Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. EG6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681162 bp
Thymine Count
679369 bp
Guanine Count
1239547 bp
Cytosine Count
1248253 bp
Genome Length
3848331 bp
Protein-coding Genes
3688 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | SPYCW_RS03760 | Not Available | Positive | 777271 - 778266 | 34891.1 |
| trbc/virb2 family protein | SPYCW_RS03765 | Not Available | Positive | 778263 - 778595 | 11465.4 |
| virb3 family type iv secretion system protein | SPYCW_RS03770 | Not Available | Positive | 778595 - 778873 | 9819.25 |
| conjugal transfer protein trbe | SPYCW_RS03775 | Not Available | Positive | 778886 - 781324 | 88819.8 |
| p-type conjugative transfer protein trbj | SPYCW_RS03780 | Not Available | Positive | 781327 - 782094 | 27314.7 |
| putative entry exclusion protein trbk-alt | SPYCW_RS03785 | Not Available | Positive | 782115 - 782393 | 10028.0 |
| p-type conjugative transfer protein trbl | SPYCW_RS03790 | Not Available | Positive | 782397 - 783761 | 44743.1 |
| conjugal transfer protein trbf | SPYCW_RS03795 | Not Available | Positive | 783758 - 784447 | 25634.5 |
| p-type conjugative transfer protein trbg | SPYCW_RS03800 | Not Available | Positive | 784444 - 785400 | 34129.8 |
| trbi/virb10 family protein | SPYCW_RS03805 | Not Available | Positive | 785397 - 786545 | 40552.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
