Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. EG6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681162 bp
Thymine Count
679369 bp
Guanine Count
1239547 bp
Cytosine Count
1248253 bp
Genome Length
3848331 bp
Protein-coding Genes
3688 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | SPYCW_RS00045 | Not Available | Negative | 9380 - 10516 | 39591.7 |
| cupin domain-containing protein | SPYCW_RS00050 | Not Available | Positive | 10777 - 11244 | 16910.8 |
| lyse family translocator | SPYCW_RS00055 | Not Available | Positive | 11241 - 11867 | 21947.3 |
| glutathione s-transferase family protein | SPYCW_RS00060 | Not Available | Negative | 11878 - 12549 | 25126.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | SPYCW_RS00065 | Not Available | Negative | 12668 - 13330 | 24041.9 |
| membrane protein insertase yidc | SPYCW_RS00070 | Not Available | Negative | 13327 - 15081 | 64041.1 |
| membrane protein insertion efficiency factor yidd | SPYCW_RS00075 | Not Available | Negative | 15130 - 15342 | 7626.5 |
| ribonuclease p protein component | SPYCW_RS00080 | Not Available | Negative | 15482 - 15820 | 12178.9 |
| 50s ribosomal protein l34 | SPYCW_RS00085 | Not Available | Negative | 15850 - 15984 | 5033.28 |
| hypothetical protein | SPYCW_RS00090 | Not Available | Negative | 16086 - 16421 | 12716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
