Xenorhabdus thuongxuanensis str. 30TX1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus thuongxuanensis str. 30TX1 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This species has a single replicon, indicating a relatively streamlined genetic structure. The genomic data for this strain is available under the accession number MKGR00000000.1. As a member of the Xenorhabdus genus, this bacterium is likely associated with entomopathogenic nematodes, playing a role in the complex interactions within soil ecosystems. Its motility, facilitated by flagella, may enhance its ability to navigate through soil environments to locate hosts or sustain symbiotic relationships with nematodes. This trait is crucial for its ecological function, as it may contribute to the bacterium's effectiveness in biocontrol applications against insect pests. In summary, the key features of Xenorhabdus thuongxuanensis str. 30TX1, including its rod shape, flagella presence, single replicon, and documented genomic information, provide insight into its potential role in soil microbiomes and its utility in biological pest management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus thuongxuanensis
Strain30TX1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus thuongxuanensis strain 30TX1 Xentx_130, whole genome

Gene Summary

Adenine Count

1119385 bp

Thymine Count

1121960 bp

Guanine Count

847972 bp

Cytosine Count

846082 bp

Genome Length

3938299 bp

Protein-coding Genes

3175 genes

Non-Coding Genes

479 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorXentx_03273Not AvailablePositive3582760 - 358317315880.3
alternative ribosome-rescue factor aXentx_03274Not AvailablePositive3583260 - 35834607759.34
potassium transporter peripheral membrane componentXentx_03275Not AvailableNegative3583502 - 358487850525.9
16s rna methyltransferaseXentx_03276Not AvailableNegative3584972 - 358625247898.0
bifunctional udp-glucuronic acid decarboxylase/udp-4-amino-4-deoxy-l-arabinose formyltransferaseXentx_03277Not AvailableNegative3586339 - 358728634477.8
peptide deformylaseXentx_03278Not AvailableNegative3587311 - 358782319445.5
dna processing protein dpraXentx_03279Not AvailablePositive3587957 - 358904539796.6
dna topoisomeraseXentx_03280Not AvailablePositive3589106 - 358965120763.2
l-threonylcarbamoyladenylate synthase tsacXentx_03281Not AvailablePositive3589653 - 359022221121.3
shikimate dehydrogenaseXentx_03282Not AvailablePositive3590229 - 359105329957.2

Displaying genes 3361 – 3370 of 3654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.