Comamonadaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Description

The Comamonadaceae bacterium is characterized by having a total of five replicons, which suggests a complex genomic architecture that may contribute to its adaptability in various environments. The organism is represented by several genomic accessions: QZKF00000000.1, SEAX00000000.1, SEAY00000000.1, PFFN00000000.1, and SEAW00000000.1. Each accession indicates a different genomic assembly or strain within the Comamonadaceae family, highlighting the genetic diversity present within this group of bacteria. The Comamonadaceae family is known for its ecological versatility, often found in soil and water environments, where it can play a role in biogeochemical cycles. The presence of multiple replicons may enable the Comamonadaceae bacterium to effectively utilize diverse substrates or respond to varying environmental stresses, which is a characteristic feature of many bacteria within this family. In summary, the Comamonadaceae bacterium, with its five replicons and multiple genomic accessions, exemplifies the genetic complexity and ecological adaptability typical of the Comamonadaceae family. This adaptability likely allows it to occupy a range of ecological niches, contributing to its role in environmental processes such as nutrient cycling and organic matter decomposition.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Comamonadaceae bacterium isolate PMG_248 scaffold_372703,

Gene Summary

Adenine Count

666254 bp

Thymine Count

663498 bp

Guanine Count

1510348 bp

Cytosine Count

1513267 bp

Genome Length

4370310 bp

Protein-coding Genes

4276 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smp-30/gluconolactonase/lre family proteinEOO30_09020Not AvailableNegative1816175 - 181713135007.1
hydroxyacid dehydrogenaseEOO30_09025Not AvailableNegative1817141 - 181813634473.8
trap transporter large permeaseEOO30_09030Not AvailableNegative1818147 - 181943045361.2
trap transporter small permeaseEOO30_09035Not AvailableNegative1819430 - 181996019061.9
trap transporter substrate-binding proteinEOO30_09040Not AvailableNegative1819967 - 182094735809.5
nad(p)-dependent oxidoreductaseEOO30_09045Not AvailableNegative1820989 - 182180729829.4
fadr family transcriptional regulatorEOO30_09050Not AvailablePositive1821924 - 182264326410.6
5-dehydro-4-deoxyglucarate dehydrataseEOO30_09055Not AvailablePositive1822715 - 182362632522.2
tripartite tricarboxylate transporter substrate binding proteinEOO30_09060Not AvailablePositive1823655 - 182461433214.1
galactarate dehydrataseEOO30_09065Not AvailablePositive1824625 - 182618755635.8

Displaying genes 1781 – 1790 of 30120 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.