Oxalobacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Description

The Oxalobacteraceae bacterium is characterized by having two replicons, which are essential for its genetic stability and function. The specific accessions associated with this organism are DPAB00000000.1 and DPRS00000000.1, indicating its genomic data is cataloged in public databases, facilitating further study and classification. This bacterium belongs to a family known for its role in the degradation of oxalate, a common organic compound. Members of the Oxalobacteraceae family are typically involved in biogeochemical cycles, particularly in the cycling of carbon and the degradation of organic matter. Their ability to metabolize oxalate can have implications for various ecosystems, as oxalate is a product of plant metabolism and can accumulate in the environment. The ecological insight provided by the presence of Oxalobacteraceae bacterium suggests a potential role in nutrient cycling and organic matter decomposition. By participating in the breakdown of oxalate, this bacterium may contribute to the maintenance of soil health and fertility. Additionally, the organism's metabolic activities could influence the availability of nutrients for other microorganisms and plants in its ecosystem. Understanding the role of such bacteria can enhance our knowledge of microbial interactions within various habitats and their contributions to ecosystem dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Oxalobacteraceae bacterium isolate UBA8502

Gene Summary

Adenine Count

830511 bp

Thymine Count

827552 bp

Guanine Count

1232098 bp

Cytosine Count

1240605 bp

Genome Length

4131676 bp

Protein-coding Genes

3697 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenaseDEQ40_11810Not AvailablePositive2062000 - 2064960109189.0
formate dehydrogenaseDEQ40_11815Not AvailablePositive2065027 - 206565622518.9
hypothetical proteinDEQ40_11820Not AvailablePositive2065653 - 20658748136.69
formate dehydrogenase subunit gammaDEQ40_11825Not AvailablePositive2065908 - 206703240291.3
hypothetical proteinDEQ40_11830Not AvailablePositive2067068 - 206739711088.5
superoxide dismutaseDEQ40_11835Not AvailablePositive2067579 - 206801914619.3
sulfurtransferase fdhdDEQ40_11840Not AvailablePositive2068030 - 206888731119.6
glutamate--trna ligaseDEQ40_11845Not AvailablePositive2068974 - 207036851636.9
Trna-alaNot AvailableNot AvailablePositive2070427 - 2070502Not Available
Trna-gluNot AvailableNot AvailablePositive2070544 - 2070619Not Available

Displaying genes 6041 – 6050 of 7954 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.