Flavobacteriaceae bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Description

The Flavobacteriaceae bacterium is a notable member of the Flavobacteriaceae family, characterized by its genetic complexity, with a total of 12 replicons. This trait suggests a diverse genetic architecture that may contribute to its adaptability in various environments. The bacterium has multiple genomic accessions, including NZXE00000000.1, PACX00000000.1, PAUJ00000000.1, PAYI00000000.1, PBNJ00000000.1, NVXD00000000.1, QBMA00000000.1, QBMR00000000.1, DMUU00000000.1, DOIK00000000.1, DPAF00000000.1, and PBHL00000000.1, indicating a well-studied organism with accessible genomic information. Flavobacteriaceae members are often associated with aquatic environments, and their diverse metabolic capabilities allow them to play significant roles in the degradation of organic materials. This ecological function is crucial for nutrient cycling, particularly in freshwater and marine ecosystems. Additionally, the presence of multiple replicons may enhance the bacterium's ability to adapt to varying environmental conditions, potentially allowing it to thrive in diverse ecological niches. In summary, the Flavobacteriaceae bacterium's complex genetic structure and its ecological role in organic matter degradation highlight its significance in both microbial ecology and nutrient cycling within aquatic environments. Understanding its genetic makeup can provide insights into the ecological functions of this bacterium and its potential applications in bioremediation and environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1099167 bp

Thymine Count

1096109 bp

Guanine Count

586769 bp

Cytosine Count

580537 bp

Genome Length

3364662 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

33 genes

# of Chromosomes/Plasmids

12

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMC87_09500Not AvailablePositive2013644 - 201607090453.0
glycosyl transferase family 1CMC87_09505Not AvailablePositive2016086 - 201737850237.9
sugar isomeraseCMC87_09510Not AvailablePositive2017379 - 201882754855.8
hypothetical proteinCMC87_09515Not AvailableNegative2018888 - 201998242563.3
excinuclease abc subunit aCMC87_09520Not AvailableNegative2020325 - 2023111104484.0
rna polymerase subunit sigma-24CMC87_09525Not AvailablePositive2023353 - 202394323438.4
endonuclease iiiCMC87_09530Not AvailableNegative2024172 - 202485226027.8
hydroxymethylglutaryl-coa synthaseCMC87_09535Not AvailableNegative2025010 - 202636851468.3
thioredoxin-dependent thiol peroxidaseCMC87_09540Not AvailablePositive2026682 - 202713716911.0
3-dehydroquinate synthaseCMC87_09545Not AvailableNegative2027214 - 202828139354.5

Displaying genes 1871 – 1880 of 27546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.