Flavobacteriaceae bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Description

The Flavobacteriaceae bacterium is a notable member of the Flavobacteriaceae family, characterized by its genetic complexity, with a total of 12 replicons. This trait suggests a diverse genetic architecture that may contribute to its adaptability in various environments. The bacterium has multiple genomic accessions, including NZXE00000000.1, PACX00000000.1, PAUJ00000000.1, PAYI00000000.1, PBNJ00000000.1, NVXD00000000.1, QBMA00000000.1, QBMR00000000.1, DMUU00000000.1, DOIK00000000.1, DPAF00000000.1, and PBHL00000000.1, indicating a well-studied organism with accessible genomic information. Flavobacteriaceae members are often associated with aquatic environments, and their diverse metabolic capabilities allow them to play significant roles in the degradation of organic materials. This ecological function is crucial for nutrient cycling, particularly in freshwater and marine ecosystems. Additionally, the presence of multiple replicons may enhance the bacterium's ability to adapt to varying environmental conditions, potentially allowing it to thrive in diverse ecological niches. In summary, the Flavobacteriaceae bacterium's complex genetic structure and its ecological role in organic matter degradation highlight its significance in both microbial ecology and nutrient cycling within aquatic environments. Understanding its genetic makeup can provide insights into the ecological functions of this bacterium and its potential applications in bioremediation and environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1099167 bp

Thymine Count

1096109 bp

Guanine Count

586769 bp

Cytosine Count

580537 bp

Genome Length

3364662 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

33 genes

# of Chromosomes/Plasmids

12

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorCMC87_05225Not AvailablePositive1138041 - 114044392396.8
trna dihydrouridine synthase dusbCMC87_05230Not AvailablePositive1140598 - 114159037275.9
abc transporter permeaseCMC87_05235Not AvailableNegative1141587 - 114278944685.0
ribosome-binding factor aCMC87_05240Not AvailableNegative1142791 - 114318614897.1
methylmalonyl-coa epimeraseCMC87_05245Not AvailablePositive1143247 - 114365115187.2
Trna-metNot AvailableNot AvailablePositive1143705 - 1143778Not Available
hypothetical proteinCMC87_05255Not AvailablePositive1143899 - 11440786687.57
riboflavin synthaseCMC87_05260Not AvailableNegative1144081 - 114466821724.2
4-hydroxythreonine-4-phosphate dehydrogenase pdxaCMC87_05265Not AvailablePositive1144722 - 114577138953.2
hypothetical proteinCMC87_05270Not AvailablePositive1145843 - 114638521495.3

Displaying genes 1031 – 1040 of 27546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.