Chitinophagaceae bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Description

The Chitinophagaceae bacterium is characterized by having eight replicons, which suggests a complex genomic structure that may contribute to its adaptability and survival in various environments. The organism's genetic material is represented by several accession numbers, including SEAH00000000.1, SDZV00000000.1, SEAA00000000.1, SDZZ00000000.1, SEAC00000000.1, SEAD00000000.1, SEAJ00000000.1, and SEAK00000000.1. These accession numbers indicate that the bacterium has been the subject of genomic sequencing, allowing for the exploration of its genetic characteristics. The presence of multiple replicons in Chitinophagaceae suggests a potential for horizontal gene transfer and a diverse metabolic capacity, which may enable it to thrive in various ecological niches. Bacteria within the Chitinophagaceae family are often associated with chitin degradation, which plays a significant role in nutrient cycling within ecosystems. By breaking down chitin, these bacteria contribute to the decomposition process, which is essential for soil fertility and the overall health of ecosystems. In summary, the Chitinophagaceae bacterium, with its eight replicons and multiple genomic accessions, represents a complex organism with significant ecological implications, particularly in nutrient cycling and the degradation of chitin in natural environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Chitinophagaceae bacterium isolate PMG_188 scaffold_628813,

Gene Summary

Adenine Count

1340377 bp

Thymine Count

1331007 bp

Guanine Count

1048080 bp

Cytosine Count

1034598 bp

Genome Length

4796863 bp

Protein-coding Genes

4154 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-dependent oxidoreductase subunit eEOO06_09845Not AvailablePositive2165474 - 216598018848.8
voc family proteinEOO06_09850Not AvailablePositive2165992 - 216641115340.0
nadh oxidoreductase (quinone) subunit fEOO06_09855Not AvailablePositive2166475 - 216783049699.8
2fe-2s iron-sulfur cluster binding domain-containing proteinEOO06_09860Not AvailablePositive2167916 - 216909743747.2
nadh-quinone oxidoreductase subunit nuohEOO06_09865Not AvailablePositive2169207 - 217024138416.1
nadh-quinone oxidoreductase subunit nuoiEOO06_09870Not AvailablePositive2170276 - 217082720884.4
nadh-quinone oxidoreductase subunit jEOO06_09875Not AvailablePositive2170841 - 217179734256.9
nadh-quinone oxidoreductase subunit nuokEOO06_09880Not AvailablePositive2171800 - 217213211941.2
nadh-quinone oxidoreductase subunit lEOO06_09885Not AvailablePositive2172224 - 217410768514.3
nadh-quinone oxidoreductase subunit mEOO06_09890Not AvailablePositive2174132 - 217561054832.6

Displaying genes 1951 – 1960 of 39401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.