Mesorhizobium sp. SEMIA 3007

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium sp. SEMIA 3007 is a notable bacterium characterized by the presence of flagella, which suggests the ability for motility. This trait is significant as it may enhance the bacterium's ability to colonize plant roots, a critical aspect of its ecological role. Additionally, Mesorhizobium sp. SEMIA 3007 possesses a single replicon, indicating a streamlined genetic organization that can influence its replication and stability. The strain is cataloged under the accession number MDLH00000000.1, which allows for further examination and verification of its genomic data within scientific databases. This identification can facilitate research into its genetic makeup and functional capacities, particularly in the context of symbiotic relationships with leguminous plants. Understanding the traits of Mesorhizobium sp. SEMIA 3007, especially its motility and genetic organization, provides insights into its ecological niche. As a member of the Mesorhizobium genus, this bacterium likely plays a vital role in nitrogen fixation, contributing to soil fertility and plant health. The presence of flagella may enhance its interactions with host plants, promoting effective nodulation and symbiosis. Thus, Mesorhizobium sp. SEMIA 3007 exemplifies the intricate relationships within soil ecosystems, showcasing the importance of microbial motility and genetic traits in ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium sp. SEMIA 3007
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium sp. SEMIA 3007 J5_76, whole genome shotgun sequence.

Gene Summary

Adenine Count

1290490 bp

Thymine Count

1288608 bp

Guanine Count

2176925 bp

Cytosine Count

2212498 bp

Genome Length

6968521 bp

Protein-coding Genes

6475 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBFX40_04110Q98E33Negative806101 - 8063438514.45
atp-dependent proteaseBFX40_04115Not AvailableNegative806562 - 80723324397.3
thioredoxinBFX40_04120P12243Negative807355 - 80836234803.3
dna-binding proteinBFX40_04125Q8I5R7Negative808444 - 80894117604.3
Trna-glyNot AvailableNot AvailablePositive809154 - 809228Not Available
hypothetical proteinBFX40_04135A6LGF6Negative810088 - 81138948862.8
n-acetylglucosamine transferaseBFX40_04145Q26240Negative812401 - 81460577337.8
tat pathway signal proteinBFX40_04150Not AvailableNegative814618 - 81508816504.6
hypothetical proteinBFX40_04155Not AvailableNegative815129 - 81549112086.8
cytochrome bBFX40_04160Not AvailableNegative815648 - 81633424404.7

Displaying genes 841 – 850 of 6544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

403 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 403 metabolites

Health Effects

No health effects information available for this bacterium.