Mesorhizobium sp. SEMIA 3007

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium sp. SEMIA 3007 is a notable bacterium characterized by the presence of flagella, which suggests the ability for motility. This trait is significant as it may enhance the bacterium's ability to colonize plant roots, a critical aspect of its ecological role. Additionally, Mesorhizobium sp. SEMIA 3007 possesses a single replicon, indicating a streamlined genetic organization that can influence its replication and stability. The strain is cataloged under the accession number MDLH00000000.1, which allows for further examination and verification of its genomic data within scientific databases. This identification can facilitate research into its genetic makeup and functional capacities, particularly in the context of symbiotic relationships with leguminous plants. Understanding the traits of Mesorhizobium sp. SEMIA 3007, especially its motility and genetic organization, provides insights into its ecological niche. As a member of the Mesorhizobium genus, this bacterium likely plays a vital role in nitrogen fixation, contributing to soil fertility and plant health. The presence of flagella may enhance its interactions with host plants, promoting effective nodulation and symbiosis. Thus, Mesorhizobium sp. SEMIA 3007 exemplifies the intricate relationships within soil ecosystems, showcasing the importance of microbial motility and genetic traits in ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium sp. SEMIA 3007
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium sp. SEMIA 3007 J5_76, whole genome shotgun sequence.

Gene Summary

Adenine Count

1290490 bp

Thymine Count

1288608 bp

Guanine Count

2176925 bp

Cytosine Count

2212498 bp

Genome Length

6968521 bp

Protein-coding Genes

6475 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligaseBFX40_09845A0M5Z9Positive2054443 - 205644373481.5
hypothetical proteinBFX40_09855Not AvailablePositive2058024 - 20582277662.46
ferredoxin iii, nif-specificBFX40_09860P55678Positive2058224 - 205854111388.7
exopolysaccharide repressor proteinBFX40_09865P55698Positive2058579 - 205889911798.3
hypothetical proteinBFX40_09870Not AvailablePositive2060652 - 206121220421.5
hypothetical proteinBFX40_09875Not AvailablePositive2061619 - 206223321507.1
hypothetical proteinBFX40_09880Not AvailablePositive2062799 - 206341321207.8
1-aminocyclopropane-1-carboxylate deaminaseBFX40_09885Q98AM7Positive2063816 - 206482936671.2
hypothetical proteinBFX40_09895Not AvailableNegative2065861 - 206618111270.3
hypothetical proteinBFX40_09900Not AvailablePositive2067060 - 20672998829.61

Displaying genes 1971 – 1980 of 6544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

403 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 403 metabolites

Health Effects

No health effects information available for this bacterium.