Pseudoalteromonas amylolytica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas amylolytica is a rod-shaped bacterium characterized by having a single replicon. This organism is part of the diverse genus Pseudoalteromonas, which is known for its ecological roles in marine environments and its ability to produce a variety of bioactive compounds. The taxonomic classification and genetic information of Pseudoalteromonas amylolytica can be accessed through its genomic sequence, noted under the accession number MKJU00000000.1. This accession provides insight into its genetic makeup, which can be critical for understanding its metabolic pathways and ecological functions. Biologically, Pseudoalteromonas species are often associated with marine habitats and are recognized for their role in the degradation of organic matter. The ability of Pseudoalteromonas amylolytica to thrive in such environments suggests its potential significance in nutrient cycling and interactions within microbial communities. In summary, the rod shape and single replicon of Pseudoalteromonas amylolytica, along with its genomic data, underscore its classification as a notable marine bacterium. Understanding this organism's characteristics can offer insights into its ecological functions and contributions to marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas amylolytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas amylolytica strain JW1

Gene Summary

Adenine Count

1377408 bp

Thymine Count

1373718 bp

Guanine Count

1075899 bp

Cytosine Count

1028812 bp

Genome Length

4856394 bp

Protein-coding Genes

3991 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium-independent anion transporterBET10_19825Not AvailablePositive4171379 - 417307360072.6
lysr family transcriptional regulatorBET10_19830Not AvailableNegative4173012 - 417389333246.2
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseBET10_19835Not AvailablePositive4173992 - 417511639755.9
s-formylglutathione hydrolaseBET10_19840Not AvailablePositive4175127 - 417596631218.9
cyclic nucleotide-binding proteinBET10_19845Not AvailablePositive4176126 - 417802171555.5
dna polymerase iii subunit epsilonBET10_19850Not AvailablePositive4178058 - 417875926608.3
bcct transporterBET10_19855Not AvailableNegative4178831 - 418041156610.7
beta-ketoacyl synthaseBET10_19860Not AvailableNegative4181894 - 418379568831.7
arac family transcriptional regulatorBET10_19865Not AvailablePositive4183913 - 418490537603.3
hypothetical proteinBET10_19870Not AvailableNegative4185550 - 418683346325.8

Displaying genes 3551 – 3560 of 4144 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

444 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da

Displaying 1–10 of 444 metabolites

Health Effects

No health effects information available for this bacterium.