Osedax symbiont bacterium Rs2_46_30_T18

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Description

Osedax symbiont bacterium Rs2_46_30_T18 is characterized by having a single replicon, which is a significant trait that can influence its genetic stability and replication dynamics. The genomic information for this bacterium is cataloged under the accession number MABF00000000.1, providing a reference for researchers interested in studying its genetic makeup. As a member of the Osedax genus, this bacterium is associated with the decomposition of marine organic matter, particularly in the context of consuming the remains of marine vertebrates. This ecological role highlights its importance in nutrient cycling within deep-sea environments. By breaking down hard organic substrates, such as bones, Osedax symbionts like Rs2_46_30_T18 contribute to the recycling of nutrients, making them available for other organisms in the ecosystem. The presence of a single replicon suggests that Rs2_46_30_T18 may have streamlined its genomic structure, which could be an adaptation to its specific ecological niche. This trait may enhance its ability to efficiently utilize the resources available in its habitat, particularly in the nutrient-scarce deep-sea environment. In summary, Osedax symbiont bacterium Rs2_46_30_T18, with its single replicon, plays a crucial role in the breakdown of marine organic materials, thereby facilitating nutrient recycling in deep-sea ecosystems. Its genomic characteristics may reflect adaptations that enable it to thrive in such specialized environments.

Taxonomy

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Species'Osedax' symbiont bacterium Rs2_46_30_T18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

'Osedax' symbiont bacterium Rs2_46_30_T18 BD02T18_scaffold_1092,

Gene Summary

Adenine Count

1092398 bp

Thymine Count

1086927 bp

Guanine Count

914530 bp

Cytosine Count

926021 bp

Genome Length

4021833 bp

Protein-coding Genes

3665 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent rna helicase rhleA9R01_17255Not AvailablePositive3706445 - 370772547389.7
3-isopropylmalate dehydrogenaseA9R01_17260Not AvailableNegative3707807 - 370888938776.9
3-isopropylmalate dehydratase small subunitA9R01_17265Not AvailableNegative3708956 - 370962124830.4
3-isopropylmalate dehydratase large subunitA9R01_17270Not AvailableNegative3709625 - 371104650510.2
lysr family transcriptional regulatorA9R01_17275Not AvailablePositive3711244 - 371210731995.6
atp-dependent rna helicaseA9R01_17280Not AvailableNegative3712104 - 371343848760.1
nad-glutamate dehydrogenaseA9R01_17285Not AvailableNegative3713701 - 3718533180677.0
hypothetical proteinA9R01_17290Not AvailablePositive3718738 - 372045064614.4
hypothetical proteinA9R01_17295Not AvailableNegative3720499 - 37206846799.03
hypothetical proteinA9R01_17300Not AvailableNegative3720867 - 372126215051.3

Displaying genes 3431 – 3440 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.