Osedax symbiont bacterium Rs2_46_30_T18

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Description

Osedax symbiont bacterium Rs2_46_30_T18 is characterized by having a single replicon, which is a significant trait that can influence its genetic stability and replication dynamics. The genomic information for this bacterium is cataloged under the accession number MABF00000000.1, providing a reference for researchers interested in studying its genetic makeup. As a member of the Osedax genus, this bacterium is associated with the decomposition of marine organic matter, particularly in the context of consuming the remains of marine vertebrates. This ecological role highlights its importance in nutrient cycling within deep-sea environments. By breaking down hard organic substrates, such as bones, Osedax symbionts like Rs2_46_30_T18 contribute to the recycling of nutrients, making them available for other organisms in the ecosystem. The presence of a single replicon suggests that Rs2_46_30_T18 may have streamlined its genomic structure, which could be an adaptation to its specific ecological niche. This trait may enhance its ability to efficiently utilize the resources available in its habitat, particularly in the nutrient-scarce deep-sea environment. In summary, Osedax symbiont bacterium Rs2_46_30_T18, with its single replicon, plays a crucial role in the breakdown of marine organic materials, thereby facilitating nutrient recycling in deep-sea ecosystems. Its genomic characteristics may reflect adaptations that enable it to thrive in such specialized environments.

Taxonomy

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Species'Osedax' symbiont bacterium Rs2_46_30_T18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

'Osedax' symbiont bacterium Rs2_46_30_T18 BD02T18_scaffold_1092,

Gene Summary

Adenine Count

1092398 bp

Thymine Count

1086927 bp

Guanine Count

914530 bp

Cytosine Count

926021 bp

Genome Length

4021833 bp

Protein-coding Genes

3665 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminomethyltransferaseA9R01_01345Not AvailableNegative286605 - 289508105459.0
sarcosine oxidase subunit deltaA9R01_01350Not AvailableNegative289505 - 28980711779.6
sarcosine oxidase subunit betaA9R01_01355Not AvailableNegative289819 - 29106645201.2
formyltetrahydrofolate deformylaseA9R01_01360Not AvailableNegative291203 - 29207532645.1
oxidoreductaseA9R01_01365Not AvailablePositive292420 - 29342735299.2
carnitine dehydrataseA9R01_01370Not AvailableNegative293591 - 29610491595.8
alcohol dehydrogenaseA9R01_01375Not AvailablePositive296440 - 29759741150.6
methylmalonate-semialdehyde dehydrogenase (acylating)A9R01_01380Not AvailablePositive297623 - 29911353301.2
iclr family transcriptional regulatorA9R01_01385Not AvailablePositive299238 - 30002928893.8
lysr family transcriptional regulatorA9R01_01390Not AvailablePositive300030 - 30094134116.8

Displaying genes 271 – 280 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.