Osedax symbiont bacterium Rs2_46_30_T18

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Description

Osedax symbiont bacterium Rs2_46_30_T18 is characterized by having a single replicon, which is a significant trait that can influence its genetic stability and replication dynamics. The genomic information for this bacterium is cataloged under the accession number MABF00000000.1, providing a reference for researchers interested in studying its genetic makeup. As a member of the Osedax genus, this bacterium is associated with the decomposition of marine organic matter, particularly in the context of consuming the remains of marine vertebrates. This ecological role highlights its importance in nutrient cycling within deep-sea environments. By breaking down hard organic substrates, such as bones, Osedax symbionts like Rs2_46_30_T18 contribute to the recycling of nutrients, making them available for other organisms in the ecosystem. The presence of a single replicon suggests that Rs2_46_30_T18 may have streamlined its genomic structure, which could be an adaptation to its specific ecological niche. This trait may enhance its ability to efficiently utilize the resources available in its habitat, particularly in the nutrient-scarce deep-sea environment. In summary, Osedax symbiont bacterium Rs2_46_30_T18, with its single replicon, plays a crucial role in the breakdown of marine organic materials, thereby facilitating nutrient recycling in deep-sea ecosystems. Its genomic characteristics may reflect adaptations that enable it to thrive in such specialized environments.

Taxonomy

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Species'Osedax' symbiont bacterium Rs2_46_30_T18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

'Osedax' symbiont bacterium Rs2_46_30_T18 BD02T18_scaffold_1092,

Gene Summary

Adenine Count

1092398 bp

Thymine Count

1086927 bp

Guanine Count

914530 bp

Cytosine Count

926021 bp

Genome Length

4021833 bp

Protein-coding Genes

3665 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l6A9R01_11975Not AvailablePositive2594332 - 259486518897.9
50s ribosomal protein l18A9R01_11980Not AvailablePositive2594879 - 259522912583.3
30s ribosomal protein s5A9R01_11985Not AvailablePositive2595241 - 259574117635.6
50s ribosomal protein l15A9R01_11990Not AvailablePositive2595938 - 259637214918.4
preprotein translocase subunit secyA9R01_11995Not AvailablePositive2596373 - 259770447963.6
30s ribosomal protein s13A9R01_12000Not AvailablePositive2597980 - 259833613175.2
30s ribosomal protein s11A9R01_12005Not AvailablePositive2598363 - 259875213647.5
30s ribosomal protein s4A9R01_12010Not AvailablePositive2598768 - 259938823040.8
dna-directed rna polymerase subunit alphaA9R01_12015Not AvailablePositive2599415 - 260041936801.9
50s ribosomal protein l17A9R01_12020Not AvailablePositive2600458 - 260084114446.5

Displaying genes 2381 – 2390 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.