Osedax symbiont bacterium Rs2_46_30_T18

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Description

Osedax symbiont bacterium Rs2_46_30_T18 is characterized by having a single replicon, which is a significant trait that can influence its genetic stability and replication dynamics. The genomic information for this bacterium is cataloged under the accession number MABF00000000.1, providing a reference for researchers interested in studying its genetic makeup. As a member of the Osedax genus, this bacterium is associated with the decomposition of marine organic matter, particularly in the context of consuming the remains of marine vertebrates. This ecological role highlights its importance in nutrient cycling within deep-sea environments. By breaking down hard organic substrates, such as bones, Osedax symbionts like Rs2_46_30_T18 contribute to the recycling of nutrients, making them available for other organisms in the ecosystem. The presence of a single replicon suggests that Rs2_46_30_T18 may have streamlined its genomic structure, which could be an adaptation to its specific ecological niche. This trait may enhance its ability to efficiently utilize the resources available in its habitat, particularly in the nutrient-scarce deep-sea environment. In summary, Osedax symbiont bacterium Rs2_46_30_T18, with its single replicon, plays a crucial role in the breakdown of marine organic materials, thereby facilitating nutrient recycling in deep-sea ecosystems. Its genomic characteristics may reflect adaptations that enable it to thrive in such specialized environments.

Taxonomy

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Species'Osedax' symbiont bacterium Rs2_46_30_T18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

'Osedax' symbiont bacterium Rs2_46_30_T18 BD02T18_scaffold_1092,

Gene Summary

Adenine Count

1092398 bp

Thymine Count

1086927 bp

Guanine Count

914530 bp

Cytosine Count

926021 bp

Genome Length

4021833 bp

Protein-coding Genes

3665 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione s-transferaseA9R01_11775Not AvailablePositive2562692 - 256330022620.9
glutathione s-transferaseA9R01_11780Not AvailablePositive2563316 - 256398425411.5
yhs domain proteinA9R01_11785Not AvailableNegative2564125 - 256456516428.6
lysr family transcriptional regulatorA9R01_11790Not AvailablePositive2564748 - 256566833400.5
eama family transporterA9R01_11795Not AvailablePositive2565711 - 256665834495.6
hypothetical proteinA9R01_11800Not AvailablePositive2566695 - 256820054924.8
hypothetical proteinA9R01_11805Not AvailableNegative2568330 - 256880917448.3
hypothetical proteinA9R01_11810Not AvailableNegative2569067 - 256962021149.0
shikimate dehydrogenaseA9R01_11815Not AvailableNegative2569621 - 257012017978.6
coproporphyrinogen iii oxidaseA9R01_11820Not AvailableNegative2570130 - 257104134395.3

Displaying genes 2341 – 2350 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.