Halorubrum sp. SD612

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD612 is a rod-shaped microorganism characterized by the presence of flagella, which suggests motility. This trait may enhance its ability to navigate its environment, potentially influencing its ecological interactions and survival strategies. The organism possesses a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various conditions. The accession number for Halorubrum sp. SD612 is NEWI00000000.1, which provides a reference for further genomic studies and analyses. The unique characteristics of this species, particularly its morphology and motility, are essential for understanding its role in its native habitat, likely involving saline or hypersaline environments, given its classification within the Halorubrum genus. In ecological terms, the motility offered by flagella may allow Halorubrum sp. SD612 to effectively exploit nutrient sources and evade unfavorable conditions. Its rod shape can also be advantageous for surface attachment and biofilm formation, which are critical factors in microbial community dynamics and ecosystem functions. Understanding these traits not only sheds light on the organism's biology but also highlights its potential ecological roles in saline ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD612
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD612


Gene Summary

Adenine Count

494767 bp

Thymine Count

493754 bp

Guanine Count

1159612 bp

Cytosine Count

1159856 bp

Genome Length

3308128 bp

Protein-coding Genes

3326 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB9G38_01940Not AvailableNegative383646 - 38534662089.7
gamma-glutamyltransferaseB9G38_01945Not AvailablePositive385579 - 38723758888.4
branched-chain amino acid abc transporter substrate-binding proteinB9G38_01950Not AvailablePositive387513 - 38890447607.7
trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3B9G38_01955Not AvailablePositive389672 - 39011615726.8
s-adenosylhomocysteine deaminaseB9G38_01960Not AvailableNegative390265 - 39158145557.1
hypothetical proteinB9G38_01965Not AvailablePositive391671 - 39201512501.6
hypothetical proteinB9G38_01970Not AvailablePositive392200 - 39270018645.8
abc transporter atp-binding proteinB9G38_01975Not AvailableNegative392774 - 39413850394.2
abc transporter atp-binding proteinB9G38_01980Not AvailableNegative394135 - 39525641107.4
abc transporter permeaseB9G38_01985Not AvailableNegative395258 - 39624435445.8

Displaying genes 381 – 390 of 3378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.