Halorubrum sp. SD612

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD612 is a rod-shaped microorganism characterized by the presence of flagella, which suggests motility. This trait may enhance its ability to navigate its environment, potentially influencing its ecological interactions and survival strategies. The organism possesses a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various conditions. The accession number for Halorubrum sp. SD612 is NEWI00000000.1, which provides a reference for further genomic studies and analyses. The unique characteristics of this species, particularly its morphology and motility, are essential for understanding its role in its native habitat, likely involving saline or hypersaline environments, given its classification within the Halorubrum genus. In ecological terms, the motility offered by flagella may allow Halorubrum sp. SD612 to effectively exploit nutrient sources and evade unfavorable conditions. Its rod shape can also be advantageous for surface attachment and biofilm formation, which are critical factors in microbial community dynamics and ecosystem functions. Understanding these traits not only sheds light on the organism's biology but also highlights its potential ecological roles in saline ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD612
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD612 NODE_402_length_1004_cov_2.88826, whole

Gene Summary

Adenine Count

494767 bp

Thymine Count

493754 bp

Guanine Count

1159612 bp

Cytosine Count

1159856 bp

Genome Length

3308128 bp

Protein-coding Genes

3326 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chemotaxis protein chedB9G38_06870Not AvailablePositive1353484 - 135405919345.6
flagella accessory c family proteinB9G38_06875Not AvailablePositive1354208 - 135603764882.1
flagellinB9G38_06880Not AvailablePositive1356027 - 135650016039.4
flagellar protein gB9G38_06885Not AvailablePositive1356501 - 135699216970.8
atpaseB9G38_06890Not AvailablePositive1356994 - 135774327503.9
hypothetical proteinB9G38_06895Not AvailablePositive1357815 - 135948862677.4
flagellar assembly protein flajB9G38_06900Not AvailablePositive1359558 - 136129463643.9
udp-glucose 4-epimeraseB9G38_06905Not AvailableNegative1361325 - 136226332720.6
zinc metalloprotease htpxB9G38_06910Not AvailablePositive1362396 - 136326832335.4
ammecr1 domain-containing proteinB9G38_06920Not AvailablePositive1364104 - 136470621617.0

Displaying genes 1341 – 1350 of 3378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.