Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. EP60837 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. EP60837 plasmid pEP1, complete sequence.
Gene Summary
Adenine Count
55778 bp
Thymine Count
55404 bp
Guanine Count
79565 bp
Cytosine Count
78468 bp
Genome Length
269215 bp
Protein-coding Genes
256 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone hfq | EP837_RS01080 | Not Available | Negative | 244832 - 245323 | 18114.3 |
| sigma-54 dependent transcriptional regulator | EP837_RS01085 | Not Available | Negative | 245465 - 246838 | 50533.6 |
| atp-binding protein | EP837_RS01090 | Not Available | Negative | 246828 - 249080 | 81725.7 |
| nitrogen regulation protein nr(i) | EP837_RS01095 | Not Available | Negative | 249176 - 250621 | 52306.2 |
| nitrogen regulation protein nr(ii) | EP837_RS01100 | Not Available | Negative | 250621 - 251730 | 39848.3 |
| trna dihydrouridine synthase dusb | EP837_RS01105 | Not Available | Negative | 251727 - 252746 | 36765.6 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EP837_RS01110 | Not Available | Positive | 252849 - 254024 | 41838.0 |
| cina family protein | EP837_RS01115 | Not Available | Positive | 254028 - 254540 | 17498.0 |
| type ii toxin-antitoxin system rata family toxin | EP837_RS01120 | Not Available | Negative | 254492 - 254962 | 17873.2 |
| lipoyl synthase | EP837_RS01125 | Not Available | Negative | 254967 - 255902 | 34533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

