Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. EP60837 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. EP60837 plasmid pEP1, complete sequence.
Gene Summary
Adenine Count
55778 bp
Thymine Count
55404 bp
Guanine Count
79565 bp
Cytosine Count
78468 bp
Genome Length
269215 bp
Protein-coding Genes
256 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | EP837_RS00095 | Not Available | Positive | 13940 - 14575 | 23391.3 |
| atp-dependent clp protease atp-binding subunit clpx | EP837_RS00100 | Not Available | Positive | 14708 - 15976 | 45900.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EP837_RS00105 | Not Available | Negative | 16093 - 16788 | 25391.0 |
| methyltransferase | EP837_RS00110 | Not Available | Positive | 16944 - 17969 | 37358.9 |
| rna polymerase sigma factor rpoh | EP837_RS00115 | Not Available | Negative | 18027 - 18938 | 34641.7 |
| rlua family pseudouridine synthase | EP837_RS00120 | Not Available | Negative | 19015 - 19965 | 34147.5 |
| mov34/mpn/pad-1 family protein | EP837_RS00125 | Not Available | Positive | 19983 - 20384 | 13692.5 |
| histidine phosphotransferase family protein | EP837_RS00130 | Not Available | Positive | 20476 - 21129 | 22721.5 |
| nitronate monooxygenase family protein | EP837_RS00135 | Not Available | Negative | 21126 - 22178 | 36121.1 |
| type i glutamate--ammonia ligase | EP837_RS00140 | Not Available | Negative | 22733 - 24145 | 52395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

