Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. EP60837 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. EP60837 plasmid pEP1, complete sequence.
Gene Summary
Adenine Count
55778 bp
Thymine Count
55404 bp
Guanine Count
79565 bp
Cytosine Count
78468 bp
Genome Length
269215 bp
Protein-coding Genes
256 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb10 | EP837_RS19685 | Not Available | Positive | 63646 - 64863 | 42260.9 |
| p-type dna transfer atpase virb11 | EP837_RS19690 | Not Available | Positive | 64866 - 65870 | 36450.7 |
| type iv secretory system conjugative dna transfer family protein | EP837_RS19695 | Not Available | Positive | 65890 - 67848 | 71031.9 |
| lpd7 domain-containing protein | EP837_RS19700 | Not Available | Positive | 67835 - 68794 | 34834.9 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | EP837_RS19705 | Not Available | Positive | 69049 - 69879 | 31289.9 |
| nucleotidyl transferase abieii/abigii toxin family protein | EP837_RS19710 | Not Available | Positive | 69879 - 70712 | 31813.2 |
| transcription elongation protein sprt | EP837_RS21710 | Not Available | Positive | 70887 - 71106 | 7688.1 |
| aaa family atpase | EP837_RS19715 | Not Available | Negative | 71203 - 73458 | 82641.7 |
| dna repair exonuclease | EP837_RS19720 | Not Available | Positive | 73898 - 75175 | 46155.6 |
| yhan family protein | EP837_RS19725 | Not Available | Positive | 75162 - 78647 | 124856.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

