Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. EP60837 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. EP60837 plasmid pEP1, complete sequence.
Gene Summary
Adenine Count
55778 bp
Thymine Count
55404 bp
Guanine Count
79565 bp
Cytosine Count
78468 bp
Genome Length
269215 bp
Protein-coding Genes
256 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit delta | EP837_RS18910 | Not Available | Positive | 195256 - 195561 | 10978.1 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EP837_RS18915 | Not Available | Positive | 195612 - 196454 | 30409.3 |
| aminodeoxychorismate synthase component i | EP837_RS18920 | Not Available | Negative | 197077 - 198306 | 44144.9 |
| alpha/beta fold hydrolase | EP837_RS18925 | Not Available | Negative | 198677 - 199372 | 25310.0 |
| type ii toxin-antitoxin system vapb family antitoxin | EP837_RS20775 | Not Available | Positive | 200651 - 200881 | 8494.88 |
| trna(fmet)-specific endonuclease vapc | EP837_RS18930 | Not Available | Positive | 200881 - 201291 | 15124.1 |
| abrb/maze/spovt family dna-binding domain-containing protein | EP837_RS18935 | Not Available | Positive | 201399 - 201644 | 8871.64 |
| pin domain-containing protein | EP837_RS18940 | Not Available | Positive | 201641 - 202030 | 13253.1 |
| duf411 domain-containing protein | EP837_RS18945 | Not Available | Positive | 202275 - 202679 | 14112.3 |
| anti-phage deoxyguanosine triphosphatase | EP837_RS18950 | Not Available | Positive | 202823 - 204160 | 49505.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

