Porphyromonadaceae bacterium NLAE-zl-C104

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium NLAE-zl-C104 is a member of the family Porphyromonadaceae, which is known for its role in various ecological contexts, particularly in anaerobic environments. This specific bacterium has been identified with a singular replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in its ecological niche. The genome of Porphyromonadaceae bacterium NLAE-zl-C104 is represented by the accession number FOZR00000000.1. This accession provides a reference for further research and analysis, enabling scientists to explore its genetic features and potential metabolic pathways. The existence of a single replicon suggests a potential for stable inheritance and regulation of essential genes, which may be critical for its survival in specific environments. Biologically, the traits of Porphyromonadaceae bacterium NLAE-zl-C104 may reflect its ecological role, likely involving interactions within microbial communities, particularly in anaerobic conditions. The family Porphyromonadaceae typically includes bacteria that participate in the degradation of complex organic materials, contributing to nutrient cycling and energy flow within their ecosystems. Understanding the characteristics of this bacterium can provide insights into microbial dynamics and the ecological significance of anaerobic microorganisms in their respective habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium NLAE-zl-C104 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type multidrug transport system, atpase and permease componentSAMN05216365_14727Not AvailablePositive3571689 - 357349467191.0
hypothetical proteinSAMN05216365_14728Not AvailableNegative3573603 - 35738338781.68
transposase (or an inactivated derivative)SAMN05216365_14729Not AvailablePositive3574127 - 357513538551.1
trna modification gtpase trmeSAMN05216365_1482Not AvailableNegative3575537 - 357688349599.7
uridine kinaseSAMN05216365_1483Not AvailableNegative3577070 - 357873764668.4
phosphate:na+ symporterSAMN05216365_1484Not AvailablePositive3579131 - 358094867758.0
translation initiation factor 1SAMN05216365_1485Not AvailablePositive3581175 - 358151312722.2
atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains)SAMN05216365_1486Not AvailablePositive3581550 - 3584918128833.0
outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeatSAMN05216365_1487Not AvailableNegative3584956 - 358681269418.0
s-formylglutathione hydrolase frmbSAMN05216365_1488Not AvailableNegative3586840 - 358765831171.2

Displaying genes 2901 – 2910 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.