Porphyromonadaceae bacterium NLAE-zl-C104

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium NLAE-zl-C104 is a member of the family Porphyromonadaceae, which is known for its role in various ecological contexts, particularly in anaerobic environments. This specific bacterium has been identified with a singular replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in its ecological niche. The genome of Porphyromonadaceae bacterium NLAE-zl-C104 is represented by the accession number FOZR00000000.1. This accession provides a reference for further research and analysis, enabling scientists to explore its genetic features and potential metabolic pathways. The existence of a single replicon suggests a potential for stable inheritance and regulation of essential genes, which may be critical for its survival in specific environments. Biologically, the traits of Porphyromonadaceae bacterium NLAE-zl-C104 may reflect its ecological role, likely involving interactions within microbial communities, particularly in anaerobic conditions. The family Porphyromonadaceae typically includes bacteria that participate in the degradation of complex organic materials, contributing to nutrient cycling and energy flow within their ecosystems. Understanding the characteristics of this bacterium can provide insights into microbial dynamics and the ecological significance of anaerobic microorganisms in their respective habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium NLAE-zl-C104 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypoxanthine phosphoribosyltransferaseSAMN05216365_14523Not AvailableNegative3506744 - 350728020028.5
predicted thiol-disulfide oxidoreductase yuxk, dcc familySAMN05216365_14524Not AvailableNegative3507356 - 350778716840.5
trna1val (adenine37-n6)-methyltransferaseSAMN05216365_14525Not AvailableNegative3507805 - 350846424512.6
atp-dependent lon proteaseSAMN05216365_14526Not AvailablePositive3508688 - 351114792634.9
cation:h+ antiporterSAMN05216365_14527Not AvailableNegative3511249 - 351220834577.8
rna polymerase sigma-70 factor, ecf subfamilySAMN05216365_14528Not AvailableNegative3512336 - 351285420326.4
molecular chaperone htpgSAMN05216365_14529Not AvailablePositive3513315 - 351521073004.1
pantothenate kinaseSAMN05216365_14530Not AvailablePositive3515404 - 351635437084.7
histidine triad (hit) family proteinSAMN05216365_14531Not AvailableNegative3516448 - 351684014770.2
transcription elongation factor greaSAMN05216365_14532Not AvailableNegative3516932 - 351740217144.8

Displaying genes 2841 – 2850 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.