Porphyromonadaceae bacterium NLAE-zl-C104

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium NLAE-zl-C104 is a member of the family Porphyromonadaceae, which is known for its role in various ecological contexts, particularly in anaerobic environments. This specific bacterium has been identified with a singular replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in its ecological niche. The genome of Porphyromonadaceae bacterium NLAE-zl-C104 is represented by the accession number FOZR00000000.1. This accession provides a reference for further research and analysis, enabling scientists to explore its genetic features and potential metabolic pathways. The existence of a single replicon suggests a potential for stable inheritance and regulation of essential genes, which may be critical for its survival in specific environments. Biologically, the traits of Porphyromonadaceae bacterium NLAE-zl-C104 may reflect its ecological role, likely involving interactions within microbial communities, particularly in anaerobic conditions. The family Porphyromonadaceae typically includes bacteria that participate in the degradation of complex organic materials, contributing to nutrient cycling and energy flow within their ecosystems. Understanding the characteristics of this bacterium can provide insights into microbial dynamics and the ecological significance of anaerobic microorganisms in their respective habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium NLAE-zl-C104 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mrna-degrading endonuclease (mrna interferase) higb, toxic component of the higab toxin-antitoxin moduleSAMN05216365_1342Not AvailableNegative3012610 - 301331427212.6
hypothetical proteinSAMN05216365_1343Not AvailableNegative3013311 - 301381419803.5
rna polymerase sigma-70 factor, ecf subfamilySAMN05216365_1344Not AvailablePositive3013905 - 301431216349.8
fecr family proteinSAMN05216365_1345Not AvailablePositive3014436 - 301544038485.1
tonb-linked outer membrane protein, susc/raga familySAMN05216365_1346Not AvailablePositive3015640 - 3018900121556.0
starch-binding associating with outer membraneSAMN05216365_1347Not AvailablePositive3018913 - 302057162957.8
nad(p)-binding rossmann-like domain-containing proteinSAMN05216365_1348Not AvailablePositive3020649 - 302243967365.2
inosine-uridine preferring nucleoside hydrolaseSAMN05216365_1349Not AvailablePositive3022384 - 302342439178.0
rele toxin of rele / relb toxin-antitoxin systemSAMN05216365_13410Not AvailableNegative3023468 - 302382113255.0
hypothetical proteinSAMN05216365_13411Not AvailableNegative3023811 - 302414612468.2

Displaying genes 2431 – 2440 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.