Porphyromonadaceae bacterium NLAE-zl-C104

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium NLAE-zl-C104 is a member of the family Porphyromonadaceae, which is known for its role in various ecological contexts, particularly in anaerobic environments. This specific bacterium has been identified with a singular replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in its ecological niche. The genome of Porphyromonadaceae bacterium NLAE-zl-C104 is represented by the accession number FOZR00000000.1. This accession provides a reference for further research and analysis, enabling scientists to explore its genetic features and potential metabolic pathways. The existence of a single replicon suggests a potential for stable inheritance and regulation of essential genes, which may be critical for its survival in specific environments. Biologically, the traits of Porphyromonadaceae bacterium NLAE-zl-C104 may reflect its ecological role, likely involving interactions within microbial communities, particularly in anaerobic conditions. The family Porphyromonadaceae typically includes bacteria that participate in the degradation of complex organic materials, contributing to nutrient cycling and energy flow within their ecosystems. Understanding the characteristics of this bacterium can provide insights into microbial dynamics and the ecological significance of anaerobic microorganisms in their respective habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium NLAE-zl-C104 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseSAMN05216365_1272Not AvailablePositive2623073 - 262382528414.2
intein n-terminal splicing regionSAMN05216365_1273Not AvailableNegative2623939 - 262457723482.5
signal transduction histidine kinaseSAMN05216365_1274Not AvailablePositive2625134 - 262768097025.5
two-component system, ntrc family, response regulator hydgSAMN05216365_1275Not AvailableNegative2627709 - 262906750913.4
xaa-pro aminopeptidaseSAMN05216365_1276Not AvailablePositive2629151 - 263032343472.8
signal transduction histidine kinaseSAMN05216365_1277Not AvailablePositive2630479 - 2634483152744.0
tonb-linked outer membrane protein, susc/raga familySAMN05216365_1278Not AvailablePositive2634790 - 2637948116569.0
starch-binding associating with outer membraneSAMN05216365_1279Not AvailablePositive2637961 - 263967965046.6
heparinase ii/iii-like proteinSAMN05216365_12710Not AvailablePositive2639772 - 264167071044.6
heparinase ii/iii-like proteinSAMN05216365_12711Not AvailablePositive2641703 - 264363173451.9

Displaying genes 2151 – 2160 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.