Porphyromonadaceae bacterium NLAE-zl-C104

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium NLAE-zl-C104 is a member of the family Porphyromonadaceae, which is known for its role in various ecological contexts, particularly in anaerobic environments. This specific bacterium has been identified with a singular replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in its ecological niche. The genome of Porphyromonadaceae bacterium NLAE-zl-C104 is represented by the accession number FOZR00000000.1. This accession provides a reference for further research and analysis, enabling scientists to explore its genetic features and potential metabolic pathways. The existence of a single replicon suggests a potential for stable inheritance and regulation of essential genes, which may be critical for its survival in specific environments. Biologically, the traits of Porphyromonadaceae bacterium NLAE-zl-C104 may reflect its ecological role, likely involving interactions within microbial communities, particularly in anaerobic conditions. The family Porphyromonadaceae typically includes bacteria that participate in the degradation of complex organic materials, contributing to nutrient cycling and energy flow within their ecosystems. Understanding the characteristics of this bacterium can provide insights into microbial dynamics and the ecological significance of anaerobic microorganisms in their respective habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium NLAE-zl-C104 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate ferredoxin oxidoreductase subunit deltaSAMN05216365_1197Not AvailableNegative2113126 - 21133568405.23
predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domainsSAMN05216365_1198Not AvailableNegative2113508 - 211426627884.5
gliding motility-associated lipoprotein gldhSAMN05216365_1199Not AvailableNegative2114285 - 211477918940.8
cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development)SAMN05216365_11910Not AvailableNegative2114763 - 211598346175.1
dna polymerase-3 subunit delta'SAMN05216365_11911Not AvailableNegative2116118 - 211722743165.1
5,10-methylenetetrahydrofolate reductase (nad(p))SAMN05216365_11912Not AvailableNegative2117227 - 211817736233.2
regulator of sigma e proteaseSAMN05216365_11913Not AvailableNegative2118262 - 211958449523.4
1-deoxy-d-xylulose 5-phosphate reductoisomeraseSAMN05216365_11914Not AvailableNegative2119627 - 212079943252.4
16s rrna processing protein rimmSAMN05216365_11915Not AvailableNegative2120905 - 212142620066.6
protein of unknown functionSAMN05216365_11916Not AvailableNegative2121431 - 212202423634.6

Displaying genes 1691 – 1700 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.