Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit beta | SAMN05216331_10927 | Not Available | Negative | 1297807 - 1298931 | 41590.8 |
| integrase/recombinase xerd | SAMN05216331_10928 | Not Available | Negative | 1299042 - 1299944 | 34858.5 |
| signal transduction histidine kinase | SAMN05216331_10929 | Not Available | Negative | 1299934 - 1302456 | 95487.0 |
| two-component system, ntrc family, response regulator hydg | SAMN05216331_10930 | Not Available | Negative | 1302464 - 1303774 | 49882.2 |
| hypothetical protein | SAMN05216331_10931 | Not Available | Negative | 1303806 - 1304150 | 13074.7 |
| cell division protein ftsb | SAMN05216331_10932 | Not Available | Negative | 1304248 - 1304562 | 12504.3 |
| dipeptidase | SAMN05216331_10933 | Not Available | Positive | 1304885 - 1306522 | 61957.9 |
| phosphoglucomutase | SAMN05216331_10934 | Not Available | Positive | 1306546 - 1308297 | 64602.1 |
| methylglyoxal synthase | SAMN05216331_10935 | Not Available | Positive | 1308395 - 1308853 | 17351.9 |
| hypothetical protein | SAMN05216331_10936 | Not Available | Positive | 1309090 - 1309734 | 24373.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
