Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl xylan esterase (axe1) | SAMN05216331_1097 | Not Available | Negative | 1269692 - 1271728 | 76046.2 |
| glucosamine-6-phosphate deaminase | SAMN05216331_1098 | Not Available | Negative | 1271725 - 1272495 | 28538.2 |
| susd and ragb outer membrane lipoprotein | SAMN05216331_1099 | Not Available | Negative | 1272565 - 1274115 | 57847.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_10910 | Not Available | Negative | 1274124 - 1277192 | 111960.0 |
| transcriptional regulator, arac family | SAMN05216331_10911 | Not Available | Positive | 1277338 - 1278558 | 47478.2 |
| long-chain acyl-coa synthetase | SAMN05216331_10912 | Not Available | Positive | 1278760 - 1280676 | 70031.5 |
| hypothetical protein | SAMN05216331_10913 | Not Available | Negative | 1280702 - 1281133 | 16271.5 |
| hypothetical protein | SAMN05216331_10914 | Not Available | Negative | 1281390 - 1283108 | 65437.2 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05216331_10915 | Not Available | Negative | 1283197 - 1284222 | 37423.0 |
| electron transfer flavoprotein beta subunit | SAMN05216331_10916 | Not Available | Negative | 1284321 - 1285193 | 31652.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
