Porphyromonadaceae bacterium KH3R12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium KH3R12 is a member of the Porphyromonadaceae family, characterized by having a single replicon. This trait indicates a streamlined genetic structure, which may contribute to its adaptability in various environments. The genetic information of this bacterium is cataloged under the accession number FNQW00000000.1, providing a reference point for further studies regarding its taxonomy and potential applications. The Porphyromonadaceae family includes bacteria that are often associated with anaerobic environments, such as the gastrointestinal tracts of animals and soil. This ecological niche suggests that Porphyromonadaceae bacterium KH3R12 may play a significant role in nutrient cycling and interactions within its habitat. Additionally, bacteria from this family are known for their potential in biotechnological applications due to their metabolic versatility. Understanding the specific functions and ecological roles of Porphyromonadaceae bacterium KH3R12 could provide insights into its contributions to microbial communities and ecosystem health. The single replicon characteristic may also imply a less complex regulatory system, potentially allowing for rapid responses to environmental changes. Further research into this bacterium's metabolic pathways and its interactions within its ecosystem may uncover valuable information about its ecological significance and potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium KH3R12 genome assembly, contig:

Gene Summary

Adenine Count

1172546 bp

Thymine Count

1169459 bp

Guanine Count

899054 bp

Cytosine Count

910252 bp

Genome Length

4154516 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-linked outer membrane protein, susc/raga familySAMN05216331_10878Not AvailableNegative1256083 - 1259343121556.0
fecr family proteinSAMN05216331_10879Not AvailableNegative1259543 - 126054738485.1
rna polymerase sigma-70 factor, ecf subfamilySAMN05216331_10880Not AvailableNegative1260671 - 126107816349.8
hypothetical proteinSAMN05216331_10881Not AvailablePositive1261169 - 126167219803.5
mrna-degrading endonuclease (mrna interferase) higb, toxic component of the higab toxin-antitoxin moduleSAMN05216331_10882Not AvailablePositive1261669 - 126237327212.6
cobalt-zinc-cadmium resistance protein czcaSAMN05216331_1092Not AvailablePositive1263011 - 126433049116.2
rna polymerase sigma-70 factor, ecf subfamilySAMN05216331_1093Not AvailableNegative1264890 - 126548323051.7
n-acetylglucosamine 6-phosphate deacetylaseSAMN05216331_1094Not AvailableNegative1265679 - 126666536087.4
glucose/galactose transporterSAMN05216331_1095Not AvailableNegative1266805 - 126820251300.8
oxidoreductase family, nad-binding rossmann foldSAMN05216331_1096Not AvailableNegative1268232 - 126968054190.1

Displaying genes 951 – 960 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.