Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_10878 | Not Available | Negative | 1256083 - 1259343 | 121556.0 |
| fecr family protein | SAMN05216331_10879 | Not Available | Negative | 1259543 - 1260547 | 38485.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216331_10880 | Not Available | Negative | 1260671 - 1261078 | 16349.8 |
| hypothetical protein | SAMN05216331_10881 | Not Available | Positive | 1261169 - 1261672 | 19803.5 |
| mrna-degrading endonuclease (mrna interferase) higb, toxic component of the higab toxin-antitoxin module | SAMN05216331_10882 | Not Available | Positive | 1261669 - 1262373 | 27212.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05216331_1092 | Not Available | Positive | 1263011 - 1264330 | 49116.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216331_1093 | Not Available | Negative | 1264890 - 1265483 | 23051.7 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN05216331_1094 | Not Available | Negative | 1265679 - 1266665 | 36087.4 |
| glucose/galactose transporter | SAMN05216331_1095 | Not Available | Negative | 1266805 - 1268202 | 51300.8 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05216331_1096 | Not Available | Negative | 1268232 - 1269680 | 54190.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
