Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05216331_10858 | Not Available | Negative | 1222202 - 1223767 | 58626.8 |
| predicted dehydrogenase | SAMN05216331_10859 | Not Available | Negative | 1223902 - 1225065 | 43789.3 |
| starch-binding associating with outer membrane | SAMN05216331_10860 | Not Available | Negative | 1225434 - 1227323 | 72262.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_10861 | Not Available | Negative | 1227336 - 1230443 | 117272.0 |
| nucleoside transporter | SAMN05216331_10862 | Not Available | Negative | 1230560 - 1231762 | 43904.5 |
| hypothetical protein | SAMN05216331_10863 | Not Available | Positive | 1232713 - 1235079 | 89663.1 |
| hypothetical protein | SAMN05216331_10864 | Not Available | Negative | 1235076 - 1236194 | 42946.5 |
| fad dependent oxidoreductase | SAMN05216331_10865 | Not Available | Negative | 1236181 - 1238070 | 70271.1 |
| hypothetical protein | SAMN05216331_10866 | Not Available | Negative | 1238084 - 1240555 | 91552.9 |
| f5/8 type c domain-containing protein | SAMN05216331_10867 | Not Available | Negative | 1240645 - 1241751 | 42460.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
